Protein–RNA interactions for Protein: Q9H9A6

LRRC40, Leucine-rich repeat-containing protein 40, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC40Q9H9A6 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
LRRC40Q9H9A6 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
LRRC40Q9H9A6 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC25.11■■□□□ 1.61
LRRC40Q9H9A6 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC25.11■■□□□ 1.61
LRRC40Q9H9A6 MIR219A2-201ENST00000608502 1504 ntBASIC25.11■■□□□ 1.61
LRRC40Q9H9A6 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC25.1■■□□□ 1.61
LRRC40Q9H9A6 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC25.1■■□□□ 1.61
LRRC40Q9H9A6 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
LRRC40Q9H9A6 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
LRRC40Q9H9A6 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC25.1■■□□□ 1.61
LRRC40Q9H9A6 SHF-207ENST00000560540 2062 ntTSL 5 BASIC25.1■■□□□ 1.61
LRRC40Q9H9A6 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC25.1■■□□□ 1.61
LRRC40Q9H9A6 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
LRRC40Q9H9A6 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
LRRC40Q9H9A6 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC25.09■■□□□ 1.61
LRRC40Q9H9A6 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC25.09■■□□□ 1.61
LRRC40Q9H9A6 MACF1-219ENST00000484793 834 ntTSL 2 BASIC25.09■■□□□ 1.61
LRRC40Q9H9A6 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC25.09■■□□□ 1.61
LRRC40Q9H9A6 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
LRRC40Q9H9A6 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
LRRC40Q9H9A6 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
LRRC40Q9H9A6 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC25.08■■□□□ 1.61
LRRC40Q9H9A6 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC25.08■■□□□ 1.61
LRRC40Q9H9A6 HLA-V-202ENST00000446817 847 ntBASIC25.08■■□□□ 1.61
LRRC40Q9H9A6 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC25.08■■□□□ 1.61
LRRC40Q9H9A6 CHST11-203ENST00000547956 936 ntTSL 2 BASIC25.08■■□□□ 1.61
LRRC40Q9H9A6 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC25.08■■□□□ 1.61
LRRC40Q9H9A6 AC142472.1-201ENST00000612013 1741 ntBASIC25.08■■□□□ 1.61
LRRC40Q9H9A6 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC25.07■■□□□ 1.6
LRRC40Q9H9A6 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC25.07■■□□□ 1.6
LRRC40Q9H9A6 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
LRRC40Q9H9A6 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
LRRC40Q9H9A6 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC25.07■■□□□ 1.6
LRRC40Q9H9A6 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
LRRC40Q9H9A6 MIR3648-2-201ENST00000581792 180 ntBASIC25.06■■□□□ 1.6
LRRC40Q9H9A6 MIR3648-1-201ENST00000615959 180 ntBASIC25.06■■□□□ 1.6
LRRC40Q9H9A6 GDI1-215ENST00000630693 786 ntTSL 4 BASIC25.06■■□□□ 1.6
LRRC40Q9H9A6 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC25.06■■□□□ 1.6
LRRC40Q9H9A6 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC25.06■■□□□ 1.6
LRRC40Q9H9A6 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC25.05■■□□□ 1.6
LRRC40Q9H9A6 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC25.05■■□□□ 1.6
LRRC40Q9H9A6 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
LRRC40Q9H9A6 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC25.05■■□□□ 1.6
LRRC40Q9H9A6 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC25.05■■□□□ 1.6
LRRC40Q9H9A6 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
LRRC40Q9H9A6 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
LRRC40Q9H9A6 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC25.04■■□□□ 1.6
LRRC40Q9H9A6 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC25.03■■□□□ 1.6
LRRC40Q9H9A6 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC25.03■■□□□ 1.6
LRRC40Q9H9A6 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
LRRC40Q9H9A6 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC25.03■■□□□ 1.6
LRRC40Q9H9A6 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC25.03■■□□□ 1.6
LRRC40Q9H9A6 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC25.02■■□□□ 1.6
LRRC40Q9H9A6 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC25.02■■□□□ 1.6
LRRC40Q9H9A6 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
LRRC40Q9H9A6 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
LRRC40Q9H9A6 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
LRRC40Q9H9A6 AC091060.1-201ENST00000623524 1766 ntBASIC25■■□□□ 1.59
LRRC40Q9H9A6 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC25■■□□□ 1.59
LRRC40Q9H9A6 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC25■■□□□ 1.59
LRRC40Q9H9A6 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC25■■□□□ 1.59
LRRC40Q9H9A6 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC24.99■■□□□ 1.59
LRRC40Q9H9A6 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC24.99■■□□□ 1.59
LRRC40Q9H9A6 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC24.99■■□□□ 1.59
LRRC40Q9H9A6 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC24.99■■□□□ 1.59
LRRC40Q9H9A6 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC24.98■■□□□ 1.59
LRRC40Q9H9A6 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
LRRC40Q9H9A6 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC24.98■■□□□ 1.59
LRRC40Q9H9A6 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC24.98■■□□□ 1.59
LRRC40Q9H9A6 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
LRRC40Q9H9A6 AC016575.1-201ENST00000607026 382 ntBASIC24.98■■□□□ 1.59
LRRC40Q9H9A6 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC24.98■■□□□ 1.59
LRRC40Q9H9A6 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
LRRC40Q9H9A6 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
LRRC40Q9H9A6 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
LRRC40Q9H9A6 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
LRRC40Q9H9A6 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC24.96■■□□□ 1.59
LRRC40Q9H9A6 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
LRRC40Q9H9A6 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC24.96■■□□□ 1.59
LRRC40Q9H9A6 MIR7108-201ENST00000614319 87 ntBASIC24.96■■□□□ 1.59
LRRC40Q9H9A6 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
LRRC40Q9H9A6 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.59
LRRC40Q9H9A6 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC24.95■■□□□ 1.58
LRRC40Q9H9A6 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC24.95■■□□□ 1.58
LRRC40Q9H9A6 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC24.94■■□□□ 1.58
LRRC40Q9H9A6 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC24.94■■□□□ 1.58
LRRC40Q9H9A6 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
LRRC40Q9H9A6 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC24.94■■□□□ 1.58
LRRC40Q9H9A6 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC24.94■■□□□ 1.58
LRRC40Q9H9A6 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC24.94■■□□□ 1.58
LRRC40Q9H9A6 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC24.94■■□□□ 1.58
LRRC40Q9H9A6 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC24.94■■□□□ 1.58
LRRC40Q9H9A6 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC24.93■■□□□ 1.58
LRRC40Q9H9A6 METRNL-202ENST00000570778 967 ntTSL 5 BASIC24.93■■□□□ 1.58
LRRC40Q9H9A6 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC24.92■■□□□ 1.58
LRRC40Q9H9A6 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
LRRC40Q9H9A6 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC24.92■■□□□ 1.58
LRRC40Q9H9A6 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC24.92■■□□□ 1.58
LRRC40Q9H9A6 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
LRRC40Q9H9A6 AL359258.2-201ENST00000564063 1566 ntBASIC24.92■■□□□ 1.58
Retrieved 100 of 98,524 protein–RNA pairs in 10.2 ms