Protein–RNA interactions for Protein: Q9H8Y1

VRTN, Vertnin, humanhuman

Predictions only

Length 702 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRTNQ9H8Y1 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC26.59■■□□□ 1.85
VRTNQ9H8Y1 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC26.59■■□□□ 1.85
VRTNQ9H8Y1 AL157400.5-201ENST00000507624 621 ntBASIC26.58■■□□□ 1.85
VRTNQ9H8Y1 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC26.57■■□□□ 1.84
VRTNQ9H8Y1 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
VRTNQ9H8Y1 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC26.57■■□□□ 1.84
VRTNQ9H8Y1 HSD17B1P1-201ENST00000590052 955 ntBASIC26.57■■□□□ 1.84
VRTNQ9H8Y1 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
VRTNQ9H8Y1 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
VRTNQ9H8Y1 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC26.56■■□□□ 1.84
VRTNQ9H8Y1 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC26.56■■□□□ 1.84
VRTNQ9H8Y1 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
VRTNQ9H8Y1 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
VRTNQ9H8Y1 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC26.55■■□□□ 1.84
VRTNQ9H8Y1 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC26.54■■□□□ 1.84
VRTNQ9H8Y1 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
VRTNQ9H8Y1 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
VRTNQ9H8Y1 HES4-202ENST00000428771 1040 ntTSL 2 BASIC26.54■■□□□ 1.84
VRTNQ9H8Y1 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC26.54■■□□□ 1.84
VRTNQ9H8Y1 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC26.54■■□□□ 1.84
VRTNQ9H8Y1 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
VRTNQ9H8Y1 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC26.54■■□□□ 1.84
VRTNQ9H8Y1 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC26.54■■□□□ 1.84
VRTNQ9H8Y1 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
VRTNQ9H8Y1 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC26.53■■□□□ 1.84
VRTNQ9H8Y1 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC26.53■■□□□ 1.84
VRTNQ9H8Y1 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
VRTNQ9H8Y1 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC26.53■■□□□ 1.84
VRTNQ9H8Y1 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
VRTNQ9H8Y1 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC26.52■■□□□ 1.84
VRTNQ9H8Y1 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
VRTNQ9H8Y1 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC26.52■■□□□ 1.84
VRTNQ9H8Y1 MOB2-207ENST00000614710 705 ntTSL 5 BASIC26.52■■□□□ 1.84
VRTNQ9H8Y1 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC26.52■■□□□ 1.84
VRTNQ9H8Y1 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC26.51■■□□□ 1.83
VRTNQ9H8Y1 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
VRTNQ9H8Y1 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
VRTNQ9H8Y1 RNF126P1-201ENST00000567452 1320 ntBASIC26.5■■□□□ 1.83
VRTNQ9H8Y1 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC26.5■■□□□ 1.83
VRTNQ9H8Y1 ECEL1P2-201ENST00000461596 1295 ntBASIC26.5■■□□□ 1.83
VRTNQ9H8Y1 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
VRTNQ9H8Y1 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC26.5■■□□□ 1.83
VRTNQ9H8Y1 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC26.5■■□□□ 1.83
VRTNQ9H8Y1 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC26.5■■□□□ 1.83
VRTNQ9H8Y1 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC26.49■■□□□ 1.83
VRTNQ9H8Y1 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
VRTNQ9H8Y1 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC26.48■■□□□ 1.83
VRTNQ9H8Y1 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC26.47■■□□□ 1.83
VRTNQ9H8Y1 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
VRTNQ9H8Y1 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
VRTNQ9H8Y1 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
VRTNQ9H8Y1 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
VRTNQ9H8Y1 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC26.46■■□□□ 1.83
VRTNQ9H8Y1 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
VRTNQ9H8Y1 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC26.45■■□□□ 1.83
VRTNQ9H8Y1 AC025884.2-201ENST00000553429 711 ntBASIC26.45■■□□□ 1.82
VRTNQ9H8Y1 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC26.45■■□□□ 1.82
VRTNQ9H8Y1 AL359504.2-201ENST00000605506 1601 ntBASIC26.44■■□□□ 1.82
VRTNQ9H8Y1 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC26.43■■□□□ 1.82
VRTNQ9H8Y1 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
VRTNQ9H8Y1 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
VRTNQ9H8Y1 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC26.43■■□□□ 1.82
VRTNQ9H8Y1 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC26.43■■□□□ 1.82
VRTNQ9H8Y1 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC26.43■■□□□ 1.82
VRTNQ9H8Y1 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC26.43■■□□□ 1.82
VRTNQ9H8Y1 AC142472.1-201ENST00000612013 1741 ntBASIC26.42■■□□□ 1.82
VRTNQ9H8Y1 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
VRTNQ9H8Y1 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC26.41■■□□□ 1.82
VRTNQ9H8Y1 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC26.41■■□□□ 1.82
VRTNQ9H8Y1 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC26.41■■□□□ 1.82
VRTNQ9H8Y1 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC26.41■■□□□ 1.82
VRTNQ9H8Y1 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
VRTNQ9H8Y1 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
VRTNQ9H8Y1 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC26.4■■□□□ 1.82
VRTNQ9H8Y1 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
VRTNQ9H8Y1 RARRES2P2-201ENST00000394842 485 ntBASIC26.4■■□□□ 1.82
VRTNQ9H8Y1 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
VRTNQ9H8Y1 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
VRTNQ9H8Y1 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC26.39■■□□□ 1.82
VRTNQ9H8Y1 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC26.39■■□□□ 1.82
VRTNQ9H8Y1 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC26.39■■□□□ 1.81
VRTNQ9H8Y1 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.81
VRTNQ9H8Y1 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC26.39■■□□□ 1.81
VRTNQ9H8Y1 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC26.39■■□□□ 1.81
VRTNQ9H8Y1 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC26.38■■□□□ 1.81
VRTNQ9H8Y1 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC26.38■■□□□ 1.81
VRTNQ9H8Y1 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC26.38■■□□□ 1.81
VRTNQ9H8Y1 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC26.38■■□□□ 1.81
VRTNQ9H8Y1 BRD4-212ENST00000630599 726 ntTSL 2 BASIC26.38■■□□□ 1.81
VRTNQ9H8Y1 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC26.38■■□□□ 1.81
VRTNQ9H8Y1 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
VRTNQ9H8Y1 SMPD5-203ENST00000639008 1464 ntBASIC26.37■■□□□ 1.81
VRTNQ9H8Y1 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC26.37■■□□□ 1.81
VRTNQ9H8Y1 AP004609.3-201ENST00000610705 1884 ntBASIC26.37■■□□□ 1.81
VRTNQ9H8Y1 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC26.37■■□□□ 1.81
VRTNQ9H8Y1 AL121749.1-202ENST00000609313 2153 ntBASIC26.37■■□□□ 1.81
VRTNQ9H8Y1 REST-210ENST00000638187 1334 ntTSL 5 BASIC26.37■■□□□ 1.81
VRTNQ9H8Y1 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC26.36■■□□□ 1.81
VRTNQ9H8Y1 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC26.36■■□□□ 1.81
VRTNQ9H8Y1 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC26.36■■□□□ 1.81
Retrieved 100 of 98,524 protein–RNA pairs in 13.6 ms