Protein–RNA interactions for Protein: Q9H5U6

ZCCHC4, Zinc finger CCHC domain-containing protein 4, humanhuman

Predictions only

Length 513 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZCCHC4Q9H5U6 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC21.65■■□□□ 1.06
ZCCHC4Q9H5U6 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
ZCCHC4Q9H5U6 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC21.64■■□□□ 1.06
ZCCHC4Q9H5U6 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC21.64■■□□□ 1.06
ZCCHC4Q9H5U6 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC21.64■■□□□ 1.06
ZCCHC4Q9H5U6 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
ZCCHC4Q9H5U6 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
ZCCHC4Q9H5U6 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
ZCCHC4Q9H5U6 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC21.63■■□□□ 1.05
ZCCHC4Q9H5U6 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
ZCCHC4Q9H5U6 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
ZCCHC4Q9H5U6 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC21.63■■□□□ 1.05
ZCCHC4Q9H5U6 CIB2-204ENST00000557846 934 ntTSL 3 BASIC21.63■■□□□ 1.05
ZCCHC4Q9H5U6 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
ZCCHC4Q9H5U6 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
ZCCHC4Q9H5U6 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
ZCCHC4Q9H5U6 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
ZCCHC4Q9H5U6 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
ZCCHC4Q9H5U6 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC21.62■■□□□ 1.05
ZCCHC4Q9H5U6 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
ZCCHC4Q9H5U6 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
ZCCHC4Q9H5U6 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
ZCCHC4Q9H5U6 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC21.61■■□□□ 1.05
ZCCHC4Q9H5U6 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
ZCCHC4Q9H5U6 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC21.6■■□□□ 1.05
ZCCHC4Q9H5U6 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
ZCCHC4Q9H5U6 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC21.6■■□□□ 1.05
ZCCHC4Q9H5U6 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC21.59■■□□□ 1.05
ZCCHC4Q9H5U6 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
ZCCHC4Q9H5U6 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC21.59■■□□□ 1.05
ZCCHC4Q9H5U6 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC21.58■■□□□ 1.05
ZCCHC4Q9H5U6 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
ZCCHC4Q9H5U6 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
ZCCHC4Q9H5U6 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
ZCCHC4Q9H5U6 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
ZCCHC4Q9H5U6 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
ZCCHC4Q9H5U6 AP004609.3-201ENST00000610705 1884 ntBASIC21.58■■□□□ 1.04
ZCCHC4Q9H5U6 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
ZCCHC4Q9H5U6 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
ZCCHC4Q9H5U6 CEBPA-AS1-201ENST00000592982 2198 ntBASIC21.57■■□□□ 1.04
ZCCHC4Q9H5U6 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC21.57■■□□□ 1.04
ZCCHC4Q9H5U6 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
ZCCHC4Q9H5U6 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC21.57■■□□□ 1.04
ZCCHC4Q9H5U6 AC087741.3-201ENST00000624270 1347 ntBASIC21.56■■□□□ 1.04
ZCCHC4Q9H5U6 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
ZCCHC4Q9H5U6 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC21.56■■□□□ 1.04
ZCCHC4Q9H5U6 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC21.56■■□□□ 1.04
ZCCHC4Q9H5U6 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
ZCCHC4Q9H5U6 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
ZCCHC4Q9H5U6 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC21.55■■□□□ 1.04
ZCCHC4Q9H5U6 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
ZCCHC4Q9H5U6 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC21.55■■□□□ 1.04
ZCCHC4Q9H5U6 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC21.55■■□□□ 1.04
ZCCHC4Q9H5U6 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
ZCCHC4Q9H5U6 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
ZCCHC4Q9H5U6 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC21.54■■□□□ 1.04
ZCCHC4Q9H5U6 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
ZCCHC4Q9H5U6 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC21.53■■□□□ 1.04
ZCCHC4Q9H5U6 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
ZCCHC4Q9H5U6 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC21.52■■□□□ 1.04
ZCCHC4Q9H5U6 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
ZCCHC4Q9H5U6 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
ZCCHC4Q9H5U6 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC21.52■■□□□ 1.04
ZCCHC4Q9H5U6 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC21.52■■□□□ 1.04
ZCCHC4Q9H5U6 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
ZCCHC4Q9H5U6 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC21.52■■□□□ 1.03
ZCCHC4Q9H5U6 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC21.51■■□□□ 1.03
ZCCHC4Q9H5U6 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
ZCCHC4Q9H5U6 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
ZCCHC4Q9H5U6 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC21.51■■□□□ 1.03
ZCCHC4Q9H5U6 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
ZCCHC4Q9H5U6 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC21.51■■□□□ 1.03
ZCCHC4Q9H5U6 NRG1-221ENST00000614767 762 ntTSL 5 BASIC21.51■■□□□ 1.03
ZCCHC4Q9H5U6 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC21.51■■□□□ 1.03
ZCCHC4Q9H5U6 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
ZCCHC4Q9H5U6 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC21.5■■□□□ 1.03
ZCCHC4Q9H5U6 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
ZCCHC4Q9H5U6 AC044849.2-201ENST00000606596 710 ntBASIC21.5■■□□□ 1.03
ZCCHC4Q9H5U6 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC21.5■■□□□ 1.03
ZCCHC4Q9H5U6 AC110285.7-201ENST00000624417 1536 ntBASIC21.5■■□□□ 1.03
ZCCHC4Q9H5U6 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
ZCCHC4Q9H5U6 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC21.49■■□□□ 1.03
ZCCHC4Q9H5U6 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC21.49■■□□□ 1.03
ZCCHC4Q9H5U6 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC21.49■■□□□ 1.03
ZCCHC4Q9H5U6 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC21.49■■□□□ 1.03
ZCCHC4Q9H5U6 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC21.49■■□□□ 1.03
ZCCHC4Q9H5U6 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
ZCCHC4Q9H5U6 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
ZCCHC4Q9H5U6 AL162393.1-201ENST00000437852 946 ntBASIC21.48■■□□□ 1.03
ZCCHC4Q9H5U6 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
ZCCHC4Q9H5U6 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
ZCCHC4Q9H5U6 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
ZCCHC4Q9H5U6 ERN1-208ENST00000606895 2068 ntBASIC21.47■■□□□ 1.03
ZCCHC4Q9H5U6 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC21.46■■□□□ 1.03
ZCCHC4Q9H5U6 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
ZCCHC4Q9H5U6 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
ZCCHC4Q9H5U6 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC21.46■■□□□ 1.03
ZCCHC4Q9H5U6 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
ZCCHC4Q9H5U6 PEX7-203ENST00000541292 945 ntTSL 5 BASIC21.46■■□□□ 1.03
ZCCHC4Q9H5U6 AC142472.1-201ENST00000612013 1741 ntBASIC21.46■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 19 ms