Protein–RNA interactions for Protein: Q9BYR8

KRTAP3-1, Keratin-associated protein 3-1, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-1Q9BYR8 AC142472.1-201ENST00000612013 1741 ntBASIC12.55□□□□□ -0.4
KRTAP3-1Q9BYR8 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
KRTAP3-1Q9BYR8 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
KRTAP3-1Q9BYR8 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
KRTAP3-1Q9BYR8 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
KRTAP3-1Q9BYR8 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC12.54□□□□□ -0.4
KRTAP3-1Q9BYR8 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
KRTAP3-1Q9BYR8 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
KRTAP3-1Q9BYR8 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC12.54□□□□□ -0.4
KRTAP3-1Q9BYR8 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
KRTAP3-1Q9BYR8 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
KRTAP3-1Q9BYR8 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
KRTAP3-1Q9BYR8 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
KRTAP3-1Q9BYR8 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
KRTAP3-1Q9BYR8 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
KRTAP3-1Q9BYR8 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
KRTAP3-1Q9BYR8 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
KRTAP3-1Q9BYR8 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC12.53□□□□□ -0.4
KRTAP3-1Q9BYR8 ERN1-208ENST00000606895 2068 ntBASIC12.53□□□□□ -0.4
KRTAP3-1Q9BYR8 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
KRTAP3-1Q9BYR8 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC12.53□□□□□ -0.4
KRTAP3-1Q9BYR8 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
KRTAP3-1Q9BYR8 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.4
KRTAP3-1Q9BYR8 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC12.52□□□□□ -0.4
KRTAP3-1Q9BYR8 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
KRTAP3-1Q9BYR8 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
KRTAP3-1Q9BYR8 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC12.52□□□□□ -0.41
KRTAP3-1Q9BYR8 CALM3-209ENST00000597743 577 ntTSL 4 BASIC12.52□□□□□ -0.41
KRTAP3-1Q9BYR8 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC12.52□□□□□ -0.41
KRTAP3-1Q9BYR8 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC12.52□□□□□ -0.41
KRTAP3-1Q9BYR8 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
KRTAP3-1Q9BYR8 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
KRTAP3-1Q9BYR8 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
KRTAP3-1Q9BYR8 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC12.51□□□□□ -0.41
KRTAP3-1Q9BYR8 PEX7-203ENST00000541292 945 ntTSL 5 BASIC12.51□□□□□ -0.41
KRTAP3-1Q9BYR8 SUZ12P1-203ENST00000578195 985 ntBASIC12.51□□□□□ -0.41
KRTAP3-1Q9BYR8 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC12.51□□□□□ -0.41
KRTAP3-1Q9BYR8 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
KRTAP3-1Q9BYR8 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
KRTAP3-1Q9BYR8 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
KRTAP3-1Q9BYR8 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
KRTAP3-1Q9BYR8 HNRNPLP2-201ENST00000568980 1570 ntBASIC12.5□□□□□ -0.41
KRTAP3-1Q9BYR8 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
KRTAP3-1Q9BYR8 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC12.5□□□□□ -0.41
KRTAP3-1Q9BYR8 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
KRTAP3-1Q9BYR8 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC12.5□□□□□ -0.41
KRTAP3-1Q9BYR8 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
KRTAP3-1Q9BYR8 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
KRTAP3-1Q9BYR8 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
KRTAP3-1Q9BYR8 WHAMMP3-201ENST00000611636 1609 ntBASIC12.49□□□□□ -0.41
KRTAP3-1Q9BYR8 DUX4L28-201ENST00000623687 678 ntBASIC12.49□□□□□ -0.41
KRTAP3-1Q9BYR8 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
KRTAP3-1Q9BYR8 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
KRTAP3-1Q9BYR8 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC12.48□□□□□ -0.41
KRTAP3-1Q9BYR8 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
KRTAP3-1Q9BYR8 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
KRTAP3-1Q9BYR8 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
KRTAP3-1Q9BYR8 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
KRTAP3-1Q9BYR8 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
KRTAP3-1Q9BYR8 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
KRTAP3-1Q9BYR8 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
KRTAP3-1Q9BYR8 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
KRTAP3-1Q9BYR8 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
KRTAP3-1Q9BYR8 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
KRTAP3-1Q9BYR8 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
KRTAP3-1Q9BYR8 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
KRTAP3-1Q9BYR8 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC12.47□□□□□ -0.41
KRTAP3-1Q9BYR8 AC110285.7-201ENST00000624417 1536 ntBASIC12.47□□□□□ -0.41
KRTAP3-1Q9BYR8 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
KRTAP3-1Q9BYR8 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
KRTAP3-1Q9BYR8 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
KRTAP3-1Q9BYR8 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
KRTAP3-1Q9BYR8 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC12.47□□□□□ -0.41
KRTAP3-1Q9BYR8 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC12.47□□□□□ -0.41
KRTAP3-1Q9BYR8 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
KRTAP3-1Q9BYR8 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
KRTAP3-1Q9BYR8 THRA-202ENST00000394121 2260 ntTSL 2 BASIC12.46□□□□□ -0.41
KRTAP3-1Q9BYR8 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC12.46□□□□□ -0.41
KRTAP3-1Q9BYR8 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
KRTAP3-1Q9BYR8 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
KRTAP3-1Q9BYR8 MED17-227ENST00000640521 2047 ntTSL 5 BASIC12.46□□□□□ -0.41
KRTAP3-1Q9BYR8 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC12.46□□□□□ -0.41
KRTAP3-1Q9BYR8 AC010501.1-201ENST00000606270 1962 ntBASIC12.46□□□□□ -0.41
KRTAP3-1Q9BYR8 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC12.46□□□□□ -0.42
KRTAP3-1Q9BYR8 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC12.46□□□□□ -0.42
KRTAP3-1Q9BYR8 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
KRTAP3-1Q9BYR8 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC12.46□□□□□ -0.42
KRTAP3-1Q9BYR8 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
KRTAP3-1Q9BYR8 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
KRTAP3-1Q9BYR8 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
KRTAP3-1Q9BYR8 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
KRTAP3-1Q9BYR8 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
KRTAP3-1Q9BYR8 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC12.45□□□□□ -0.42
KRTAP3-1Q9BYR8 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
KRTAP3-1Q9BYR8 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
KRTAP3-1Q9BYR8 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
KRTAP3-1Q9BYR8 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
KRTAP3-1Q9BYR8 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
KRTAP3-1Q9BYR8 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC12.44□□□□□ -0.42
KRTAP3-1Q9BYR8 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms