Protein–RNA interactions for Protein: Q99731

CCL19, C-C motif chemokine 19, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL19Q99731 YBX1P4-201ENST00000392794 808 ntBASIC21.14■□□□□ 0.97
CCL19Q99731 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CCL19Q99731 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC21.14■□□□□ 0.97
CCL19Q99731 GPI-201ENST00000356487 2210 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CCL19Q99731 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CCL19Q99731 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
CCL19Q99731 SPCS2P3-201ENST00000500401 656 ntBASIC21.13■□□□□ 0.97
CCL19Q99731 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC21.13■□□□□ 0.97
CCL19Q99731 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
CCL19Q99731 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC21.13■□□□□ 0.97
CCL19Q99731 AC018755.3-202ENST00000596210 929 ntBASIC21.13■□□□□ 0.97
CCL19Q99731 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC21.13■□□□□ 0.97
CCL19Q99731 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC21.13■□□□□ 0.97
CCL19Q99731 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC21.13■□□□□ 0.97
CCL19Q99731 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
CCL19Q99731 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
CCL19Q99731 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CCL19Q99731 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
CCL19Q99731 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
CCL19Q99731 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CCL19Q99731 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CCL19Q99731 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
CCL19Q99731 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CCL19Q99731 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC21.1■□□□□ 0.97
CCL19Q99731 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC21.1■□□□□ 0.97
CCL19Q99731 ABCB10P3-201ENST00000561950 2166 ntBASIC21.1■□□□□ 0.97
CCL19Q99731 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CCL19Q99731 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CCL19Q99731 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC21.1■□□□□ 0.97
CCL19Q99731 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
CCL19Q99731 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
CCL19Q99731 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CCL19Q99731 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CCL19Q99731 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CCL19Q99731 BEX3-202ENST00000372634 753 ntTSL 2 BASIC21.09■□□□□ 0.97
CCL19Q99731 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC21.09■□□□□ 0.97
CCL19Q99731 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CCL19Q99731 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC21.09■□□□□ 0.97
CCL19Q99731 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC21.09■□□□□ 0.97
CCL19Q99731 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
CCL19Q99731 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC21.08■□□□□ 0.97
CCL19Q99731 CERS2-201ENST00000271688 2544 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.97
CCL19Q99731 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
CCL19Q99731 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
CCL19Q99731 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CCL19Q99731 AP002414.2-202ENST00000590929 1450 ntBASIC21.07■□□□□ 0.96
CCL19Q99731 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC21.07■□□□□ 0.96
CCL19Q99731 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CCL19Q99731 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
CCL19Q99731 AC009299.2-201ENST00000482477 511 ntBASIC21.07■□□□□ 0.96
CCL19Q99731 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC21.06■□□□□ 0.96
CCL19Q99731 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
CCL19Q99731 AL139393.2-201ENST00000608721 2025 ntBASIC21.05■□□□□ 0.96
CCL19Q99731 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CCL19Q99731 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CCL19Q99731 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC21.05■□□□□ 0.96
CCL19Q99731 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC21.05■□□□□ 0.96
CCL19Q99731 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC21.05■□□□□ 0.96
CCL19Q99731 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CCL19Q99731 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC21.05■□□□□ 0.96
CCL19Q99731 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
CCL19Q99731 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CCL19Q99731 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
CCL19Q99731 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
CCL19Q99731 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC21.04■□□□□ 0.96
CCL19Q99731 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC21.04■□□□□ 0.96
CCL19Q99731 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CCL19Q99731 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CCL19Q99731 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
CCL19Q99731 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CCL19Q99731 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC21.03■□□□□ 0.96
CCL19Q99731 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CCL19Q99731 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
CCL19Q99731 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
CCL19Q99731 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
CCL19Q99731 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
CCL19Q99731 TFEB-204ENST00000373033 2331 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CCL19Q99731 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC21.01■□□□□ 0.95
CCL19Q99731 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC21.01■□□□□ 0.95
CCL19Q99731 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CCL19Q99731 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CCL19Q99731 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC21.01■□□□□ 0.95
CCL19Q99731 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CCL19Q99731 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC21■□□□□ 0.95
CCL19Q99731 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
CCL19Q99731 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CCL19Q99731 AC103834.1-201ENST00000520383 144 ntBASIC20.99■□□□□ 0.95
CCL19Q99731 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CCL19Q99731 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
CCL19Q99731 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC20.99■□□□□ 0.95
CCL19Q99731 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CCL19Q99731 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CCL19Q99731 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
CCL19Q99731 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CCL19Q99731 IDNK-203ENST00000405990 629 ntTSL 2 BASIC20.98■□□□□ 0.95
CCL19Q99731 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CCL19Q99731 PVT1_1.1-201ENST00000615125 194 ntBASIC20.98■□□□□ 0.95
CCL19Q99731 AL359504.2-201ENST00000605506 1601 ntBASIC20.97■□□□□ 0.95
CCL19Q99731 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CCL19Q99731 HES6-204ENST00000409182 863 ntTSL 2 BASIC20.97■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 88.6 ms