Protein–RNA interactions for Protein: Q92922

SMARCC1, SWI/SNF complex subunit SMARCC1, humanhuman

Predicted RBP Predictions only

Length 1,105 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1Q92922 AC018755.3-202ENST00000596210 929 ntBASIC32.26■■■□□ 2.75
SMARCC1Q92922 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC32.26■■■□□ 2.75
SMARCC1Q92922 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC32.26■■■□□ 2.75
SMARCC1Q92922 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC32.25■■■□□ 2.75
SMARCC1Q92922 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC32.25■■■□□ 2.75
SMARCC1Q92922 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC32.25■■■□□ 2.75
SMARCC1Q92922 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC32.25■■■□□ 2.75
SMARCC1Q92922 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC32.24■■■□□ 2.75
SMARCC1Q92922 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC32.24■■■□□ 2.75
SMARCC1Q92922 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC32.24■■■□□ 2.75
SMARCC1Q92922 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC32.24■■■□□ 2.75
SMARCC1Q92922 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC32.24■■■□□ 2.75
SMARCC1Q92922 HES6-204ENST00000409182 863 ntTSL 2 BASIC32.24■■■□□ 2.75
SMARCC1Q92922 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC32.24■■■□□ 2.75
SMARCC1Q92922 PVT1_1.1-201ENST00000615125 194 ntBASIC32.24■■■□□ 2.75
SMARCC1Q92922 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC32.23■■■□□ 2.75
SMARCC1Q92922 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC32.23■■■□□ 2.75
SMARCC1Q92922 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC32.22■■■□□ 2.75
SMARCC1Q92922 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC32.22■■■□□ 2.75
SMARCC1Q92922 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC32.22■■■□□ 2.75
SMARCC1Q92922 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC32.21■■■□□ 2.75
SMARCC1Q92922 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC32.2■■■□□ 2.75
SMARCC1Q92922 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC32.2■■■□□ 2.75
SMARCC1Q92922 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC32.2■■■□□ 2.75
SMARCC1Q92922 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC32.2■■■□□ 2.75
SMARCC1Q92922 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC32.19■■■□□ 2.74
SMARCC1Q92922 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC32.19■■■□□ 2.74
SMARCC1Q92922 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC32.19■■■□□ 2.74
SMARCC1Q92922 AC008105.3-203ENST00000591365 2238 ntTSL 2 BASIC32.19■■■□□ 2.74
SMARCC1Q92922 MIR4508-201ENST00000584178 70 ntBASIC32.19■■■□□ 2.74
SMARCC1Q92922 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC32.19■■■□□ 2.74
SMARCC1Q92922 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC32.18■■■□□ 2.74
SMARCC1Q92922 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC32.18■■■□□ 2.74
SMARCC1Q92922 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC32.18■■■□□ 2.74
SMARCC1Q92922 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC32.17■■■□□ 2.74
SMARCC1Q92922 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC32.16■■■□□ 2.74
SMARCC1Q92922 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC32.16■■■□□ 2.74
SMARCC1Q92922 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC32.16■■■□□ 2.74
SMARCC1Q92922 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC32.16■■■□□ 2.74
SMARCC1Q92922 GPI-201ENST00000356487 2210 ntAPPRIS P1 TSL 1 (best) BASIC32.15■■■□□ 2.74
SMARCC1Q92922 IDNK-203ENST00000405990 629 ntTSL 2 BASIC32.15■■■□□ 2.74
SMARCC1Q92922 GUSBP5-201ENST00000418136 578 ntBASIC32.15■■■□□ 2.74
SMARCC1Q92922 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC32.15■■■□□ 2.74
SMARCC1Q92922 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC32.15■■■□□ 2.74
SMARCC1Q92922 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC32.14■■■□□ 2.74
SMARCC1Q92922 UBP1-201ENST00000283628 2074 ntAPPRIS P3 TSL 2 BASIC32.14■■■□□ 2.74
SMARCC1Q92922 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC32.13■■■□□ 2.73
SMARCC1Q92922 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC32.13■■■□□ 2.73
SMARCC1Q92922 OR2A1-AS1-204ENST00000470435 602 ntBASIC32.13■■■□□ 2.73
SMARCC1Q92922 AC131212.1-201ENST00000613771 668 ntBASIC32.13■■■□□ 2.73
SMARCC1Q92922 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC32.12■■■□□ 2.73
SMARCC1Q92922 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC32.12■■■□□ 2.73
SMARCC1Q92922 IDNK-201ENST00000376417 511 ntTSL 5 BASIC32.12■■■□□ 2.73
SMARCC1Q92922 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC32.12■■■□□ 2.73
SMARCC1Q92922 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC32.11■■■□□ 2.73
SMARCC1Q92922 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC32.11■■■□□ 2.73
SMARCC1Q92922 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC32.11■■■□□ 2.73
SMARCC1Q92922 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC32.1■■■□□ 2.73
SMARCC1Q92922 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC32.1■■■□□ 2.73
SMARCC1Q92922 AC019069.1-201ENST00000610008 1333 ntBASIC32.1■■■□□ 2.73
SMARCC1Q92922 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC32.1■■■□□ 2.73
SMARCC1Q92922 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC32.1■■■□□ 2.73
SMARCC1Q92922 MTURN-203ENST00000409688 843 ntTSL 2 BASIC32.1■■■□□ 2.73
SMARCC1Q92922 AP002414.2-202ENST00000590929 1450 ntBASIC32.1■■■□□ 2.73
SMARCC1Q92922 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC32.09■■■□□ 2.73
SMARCC1Q92922 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC32.08■■■□□ 2.73
SMARCC1Q92922 THA1P-201ENST00000590384 1145 ntBASIC32.08■■■□□ 2.73
SMARCC1Q92922 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC32.08■■■□□ 2.73
SMARCC1Q92922 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC32.08■■■□□ 2.73
SMARCC1Q92922 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC32.08■■■□□ 2.73
SMARCC1Q92922 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC32.07■■■□□ 2.72
SMARCC1Q92922 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC32.07■■■□□ 2.72
SMARCC1Q92922 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC32.07■■■□□ 2.72
SMARCC1Q92922 MTX2-204ENST00000443241 799 ntTSL 3 BASIC32.06■■■□□ 2.72
SMARCC1Q92922 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC32.06■■■□□ 2.72
SMARCC1Q92922 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC32.06■■■□□ 2.72
SMARCC1Q92922 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC32.06■■■□□ 2.72
SMARCC1Q92922 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC32.05■■■□□ 2.72
SMARCC1Q92922 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC32.05■■■□□ 2.72
SMARCC1Q92922 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC32.05■■■□□ 2.72
SMARCC1Q92922 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC32.05■■■□□ 2.72
SMARCC1Q92922 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC32.04■■■□□ 2.72
SMARCC1Q92922 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC32.04■■■□□ 2.72
SMARCC1Q92922 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC32.04■■■□□ 2.72
SMARCC1Q92922 AC103724.3-201ENST00000564481 992 ntBASIC32.04■■■□□ 2.72
SMARCC1Q92922 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC32.04■■■□□ 2.72
SMARCC1Q92922 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC32.04■■■□□ 2.72
SMARCC1Q92922 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC32.04■■■□□ 2.72
SMARCC1Q92922 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC32.04■■■□□ 2.72
SMARCC1Q92922 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC32.03■■■□□ 2.72
SMARCC1Q92922 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC32.03■■■□□ 2.72
SMARCC1Q92922 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC32.03■■■□□ 2.72
SMARCC1Q92922 PRTG-204ENST00000561292 833 ntTSL 3 BASIC32.03■■■□□ 2.72
SMARCC1Q92922 AL031848.2-201ENST00000607670 837 ntBASIC32.03■■■□□ 2.72
SMARCC1Q92922 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC32.03■■■□□ 2.72
SMARCC1Q92922 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC32.02■■■□□ 2.72
SMARCC1Q92922 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC32.02■■■□□ 2.72
SMARCC1Q92922 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC32.02■■■□□ 2.72
SMARCC1Q92922 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC32.02■■■□□ 2.72
SMARCC1Q92922 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC32.01■■■□□ 2.72
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms