Protein–RNA interactions for Protein: Q8WU17

RNF139, E3 ubiquitin-protein ligase RNF139, humanhuman

Predictions only

Length 664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF139Q8WU17 HES4-202ENST00000428771 1040 ntTSL 2 BASIC26.03■■□□□ 1.76
RNF139Q8WU17 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC26.03■■□□□ 1.76
RNF139Q8WU17 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC26.03■■□□□ 1.76
RNF139Q8WU17 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
RNF139Q8WU17 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
RNF139Q8WU17 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
RNF139Q8WU17 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC26.02■■□□□ 1.76
RNF139Q8WU17 BRD4-212ENST00000630599 726 ntTSL 2 BASIC26.02■■□□□ 1.76
RNF139Q8WU17 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC26.01■■□□□ 1.75
RNF139Q8WU17 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC26.01■■□□□ 1.75
RNF139Q8WU17 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC26■■□□□ 1.75
RNF139Q8WU17 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC26■■□□□ 1.75
RNF139Q8WU17 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
RNF139Q8WU17 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
RNF139Q8WU17 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC25.99■■□□□ 1.75
RNF139Q8WU17 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC25.99■■□□□ 1.75
RNF139Q8WU17 SHF-208ENST00000560734 1731 ntTSL 3 BASIC25.99■■□□□ 1.75
RNF139Q8WU17 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
RNF139Q8WU17 RNF126P1-201ENST00000567452 1320 ntBASIC25.98■■□□□ 1.75
RNF139Q8WU17 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC25.98■■□□□ 1.75
RNF139Q8WU17 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
RNF139Q8WU17 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC25.97■■□□□ 1.75
RNF139Q8WU17 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
RNF139Q8WU17 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
RNF139Q8WU17 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC25.96■■□□□ 1.75
RNF139Q8WU17 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC25.96■■□□□ 1.75
RNF139Q8WU17 WHAMMP3-201ENST00000611636 1609 ntBASIC25.95■■□□□ 1.74
RNF139Q8WU17 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
RNF139Q8WU17 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC25.94■■□□□ 1.74
RNF139Q8WU17 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
RNF139Q8WU17 RARRES2P2-201ENST00000394842 485 ntBASIC25.93■■□□□ 1.74
RNF139Q8WU17 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC25.93■■□□□ 1.74
RNF139Q8WU17 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC25.93■■□□□ 1.74
RNF139Q8WU17 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
RNF139Q8WU17 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC25.92■■□□□ 1.74
RNF139Q8WU17 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
RNF139Q8WU17 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
RNF139Q8WU17 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC25.92■■□□□ 1.74
RNF139Q8WU17 AC092296.2-201ENST00000589470 999 ntBASIC25.92■■□□□ 1.74
RNF139Q8WU17 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC25.92■■□□□ 1.74
RNF139Q8WU17 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
RNF139Q8WU17 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC25.91■■□□□ 1.74
RNF139Q8WU17 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC25.91■■□□□ 1.74
RNF139Q8WU17 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC25.91■■□□□ 1.74
RNF139Q8WU17 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC25.9■■□□□ 1.74
RNF139Q8WU17 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
RNF139Q8WU17 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC25.9■■□□□ 1.74
RNF139Q8WU17 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC25.89■■□□□ 1.74
RNF139Q8WU17 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.74
RNF139Q8WU17 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC25.89■■□□□ 1.74
RNF139Q8WU17 ECEL1P2-201ENST00000461596 1295 ntBASIC25.89■■□□□ 1.74
RNF139Q8WU17 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC25.89■■□□□ 1.74
RNF139Q8WU17 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.73
RNF139Q8WU17 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC25.89■■□□□ 1.73
RNF139Q8WU17 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
RNF139Q8WU17 MOB2-207ENST00000614710 705 ntTSL 5 BASIC25.88■■□□□ 1.73
RNF139Q8WU17 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC25.88■■□□□ 1.73
RNF139Q8WU17 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC25.88■■□□□ 1.73
RNF139Q8WU17 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC25.88■■□□□ 1.73
RNF139Q8WU17 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC25.88■■□□□ 1.73
RNF139Q8WU17 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC25.88■■□□□ 1.73
RNF139Q8WU17 AL157400.5-201ENST00000507624 621 ntBASIC25.87■■□□□ 1.73
RNF139Q8WU17 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC25.87■■□□□ 1.73
RNF139Q8WU17 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC25.86■■□□□ 1.73
RNF139Q8WU17 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
RNF139Q8WU17 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC25.86■■□□□ 1.73
RNF139Q8WU17 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC25.86■■□□□ 1.73
RNF139Q8WU17 AL121749.1-202ENST00000609313 2153 ntBASIC25.85■■□□□ 1.73
RNF139Q8WU17 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
RNF139Q8WU17 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC25.85■■□□□ 1.73
RNF139Q8WU17 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC25.85■■□□□ 1.73
RNF139Q8WU17 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC25.84■■□□□ 1.73
RNF139Q8WU17 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC25.84■■□□□ 1.73
RNF139Q8WU17 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC25.84■■□□□ 1.73
RNF139Q8WU17 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC25.83■■□□□ 1.73
RNF139Q8WU17 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC25.83■■□□□ 1.73
RNF139Q8WU17 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
RNF139Q8WU17 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC25.83■■□□□ 1.73
RNF139Q8WU17 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.72
RNF139Q8WU17 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC25.82■■□□□ 1.72
RNF139Q8WU17 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
RNF139Q8WU17 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
RNF139Q8WU17 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
RNF139Q8WU17 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC25.81■■□□□ 1.72
RNF139Q8WU17 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC25.81■■□□□ 1.72
RNF139Q8WU17 REST-210ENST00000638187 1334 ntTSL 5 BASIC25.81■■□□□ 1.72
RNF139Q8WU17 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC25.81■■□□□ 1.72
RNF139Q8WU17 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC25.81■■□□□ 1.72
RNF139Q8WU17 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
RNF139Q8WU17 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
RNF139Q8WU17 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC25.8■■□□□ 1.72
RNF139Q8WU17 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC25.8■■□□□ 1.72
RNF139Q8WU17 AL449106.1-201ENST00000608517 1980 ntBASIC25.8■■□□□ 1.72
RNF139Q8WU17 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
RNF139Q8WU17 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC25.79■■□□□ 1.72
RNF139Q8WU17 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC25.79■■□□□ 1.72
RNF139Q8WU17 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC25.79■■□□□ 1.72
RNF139Q8WU17 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC25.79■■□□□ 1.72
RNF139Q8WU17 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC25.79■■□□□ 1.72
RNF139Q8WU17 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC25.79■■□□□ 1.72
Retrieved 100 of 98,524 protein–RNA pairs in 72.8 ms