Protein–RNA interactions for Protein: Q8NCL8

TMEM116, Transmembrane protein 116, humanhuman

Predictions only

Length 245 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116Q8NCL8 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TMEM116Q8NCL8 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
TMEM116Q8NCL8 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
TMEM116Q8NCL8 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
TMEM116Q8NCL8 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TMEM116Q8NCL8 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
TMEM116Q8NCL8 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TMEM116Q8NCL8 HGH1-207ENST00000628266 258 ntTSL 5 BASIC19.43■□□□□ 0.7
TMEM116Q8NCL8 AP004609.3-201ENST00000610705 1884 ntBASIC19.43■□□□□ 0.7
TMEM116Q8NCL8 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
TMEM116Q8NCL8 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
TMEM116Q8NCL8 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC19.42■□□□□ 0.7
TMEM116Q8NCL8 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC19.42■□□□□ 0.7
TMEM116Q8NCL8 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC19.42■□□□□ 0.7
TMEM116Q8NCL8 MLEC-202ENST00000412616 841 ntTSL 3 BASIC19.41■□□□□ 0.7
TMEM116Q8NCL8 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
TMEM116Q8NCL8 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
TMEM116Q8NCL8 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC19.41■□□□□ 0.7
TMEM116Q8NCL8 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
TMEM116Q8NCL8 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC19.41■□□□□ 0.7
TMEM116Q8NCL8 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TMEM116Q8NCL8 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TMEM116Q8NCL8 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
TMEM116Q8NCL8 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
TMEM116Q8NCL8 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC19.4■□□□□ 0.7
TMEM116Q8NCL8 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
TMEM116Q8NCL8 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC19.4■□□□□ 0.7
TMEM116Q8NCL8 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC19.4■□□□□ 0.7
TMEM116Q8NCL8 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
TMEM116Q8NCL8 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
TMEM116Q8NCL8 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC19.39■□□□□ 0.69
TMEM116Q8NCL8 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
TMEM116Q8NCL8 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
TMEM116Q8NCL8 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC19.38■□□□□ 0.69
TMEM116Q8NCL8 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC19.38■□□□□ 0.69
TMEM116Q8NCL8 WHAMMP3-201ENST00000611636 1609 ntBASIC19.38■□□□□ 0.69
TMEM116Q8NCL8 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC19.37■□□□□ 0.69
TMEM116Q8NCL8 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TMEM116Q8NCL8 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC19.37■□□□□ 0.69
TMEM116Q8NCL8 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
TMEM116Q8NCL8 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC19.37■□□□□ 0.69
TMEM116Q8NCL8 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
TMEM116Q8NCL8 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
TMEM116Q8NCL8 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
TMEM116Q8NCL8 AC142472.1-201ENST00000612013 1741 ntBASIC19.37■□□□□ 0.69
TMEM116Q8NCL8 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
TMEM116Q8NCL8 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC19.36■□□□□ 0.69
TMEM116Q8NCL8 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC19.35■□□□□ 0.69
TMEM116Q8NCL8 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
TMEM116Q8NCL8 RPS2-210ENST00000530225 765 ntTSL 2 BASIC19.35■□□□□ 0.69
TMEM116Q8NCL8 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TMEM116Q8NCL8 AC092803.2-201ENST00000564287 1899 ntBASIC19.35■□□□□ 0.69
TMEM116Q8NCL8 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
TMEM116Q8NCL8 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
TMEM116Q8NCL8 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
TMEM116Q8NCL8 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC19.33■□□□□ 0.69
TMEM116Q8NCL8 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
TMEM116Q8NCL8 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
TMEM116Q8NCL8 LINC01971-201ENST00000617888 1048 ntBASIC19.33■□□□□ 0.68
TMEM116Q8NCL8 DUSP8P4-201ENST00000399538 1761 ntBASIC19.33■□□□□ 0.68
TMEM116Q8NCL8 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
TMEM116Q8NCL8 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TMEM116Q8NCL8 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC19.32■□□□□ 0.68
TMEM116Q8NCL8 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
TMEM116Q8NCL8 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TMEM116Q8NCL8 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TMEM116Q8NCL8 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
TMEM116Q8NCL8 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TMEM116Q8NCL8 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TMEM116Q8NCL8 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TMEM116Q8NCL8 ZNRF2P2-203ENST00000454624 420 ntBASIC19.3■□□□□ 0.68
TMEM116Q8NCL8 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TMEM116Q8NCL8 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC19.3■□□□□ 0.68
TMEM116Q8NCL8 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC19.3■□□□□ 0.68
TMEM116Q8NCL8 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC19.3■□□□□ 0.68
TMEM116Q8NCL8 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
TMEM116Q8NCL8 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC19.3■□□□□ 0.68
TMEM116Q8NCL8 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
TMEM116Q8NCL8 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TMEM116Q8NCL8 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC19.29■□□□□ 0.68
TMEM116Q8NCL8 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
TMEM116Q8NCL8 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
TMEM116Q8NCL8 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
TMEM116Q8NCL8 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC19.28■□□□□ 0.68
TMEM116Q8NCL8 ABHD17AP4-201ENST00000411545 909 ntBASIC19.28■□□□□ 0.68
TMEM116Q8NCL8 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC19.28■□□□□ 0.68
TMEM116Q8NCL8 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC19.28■□□□□ 0.68
TMEM116Q8NCL8 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
TMEM116Q8NCL8 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC19.28■□□□□ 0.68
TMEM116Q8NCL8 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
TMEM116Q8NCL8 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
TMEM116Q8NCL8 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
TMEM116Q8NCL8 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
TMEM116Q8NCL8 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
TMEM116Q8NCL8 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
TMEM116Q8NCL8 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC19.27■□□□□ 0.67
TMEM116Q8NCL8 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
TMEM116Q8NCL8 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
TMEM116Q8NCL8 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TMEM116Q8NCL8 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms