Protein–RNA interactions for Protein: Q8N5M4

TTC9C, Tetratricopeptide repeat protein 9C, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC9CQ8N5M4 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC19.51■□□□□ 0.71
TTC9CQ8N5M4 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC19.51■□□□□ 0.71
TTC9CQ8N5M4 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC19.51■□□□□ 0.71
TTC9CQ8N5M4 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
TTC9CQ8N5M4 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC19.5■□□□□ 0.71
TTC9CQ8N5M4 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
TTC9CQ8N5M4 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC19.5■□□□□ 0.71
TTC9CQ8N5M4 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
TTC9CQ8N5M4 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
TTC9CQ8N5M4 PKM-203ENST00000389093 2279 ntTSL 5 BASIC19.49■□□□□ 0.71
TTC9CQ8N5M4 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC19.49■□□□□ 0.71
TTC9CQ8N5M4 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
TTC9CQ8N5M4 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC19.49■□□□□ 0.71
TTC9CQ8N5M4 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC19.49■□□□□ 0.71
TTC9CQ8N5M4 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
TTC9CQ8N5M4 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC19.48■□□□□ 0.71
TTC9CQ8N5M4 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
TTC9CQ8N5M4 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
TTC9CQ8N5M4 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
TTC9CQ8N5M4 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
TTC9CQ8N5M4 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
TTC9CQ8N5M4 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC19.47■□□□□ 0.71
TTC9CQ8N5M4 METRNL-202ENST00000570778 967 ntTSL 5 BASIC19.47■□□□□ 0.71
TTC9CQ8N5M4 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
TTC9CQ8N5M4 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
TTC9CQ8N5M4 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
TTC9CQ8N5M4 AP004609.3-201ENST00000610705 1884 ntBASIC19.47■□□□□ 0.71
TTC9CQ8N5M4 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
TTC9CQ8N5M4 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
TTC9CQ8N5M4 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
TTC9CQ8N5M4 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC19.47■□□□□ 0.71
TTC9CQ8N5M4 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
TTC9CQ8N5M4 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
TTC9CQ8N5M4 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TTC9CQ8N5M4 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
TTC9CQ8N5M4 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
TTC9CQ8N5M4 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
TTC9CQ8N5M4 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
TTC9CQ8N5M4 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
TTC9CQ8N5M4 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TTC9CQ8N5M4 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
TTC9CQ8N5M4 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TTC9CQ8N5M4 AC142472.1-201ENST00000612013 1741 ntBASIC19.45■□□□□ 0.7
TTC9CQ8N5M4 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
TTC9CQ8N5M4 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
TTC9CQ8N5M4 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TTC9CQ8N5M4 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TTC9CQ8N5M4 PVT1-219ENST00000523427 938 ntTSL 3 BASIC19.44■□□□□ 0.7
TTC9CQ8N5M4 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
TTC9CQ8N5M4 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
TTC9CQ8N5M4 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
TTC9CQ8N5M4 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
TTC9CQ8N5M4 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC19.43■□□□□ 0.7
TTC9CQ8N5M4 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
TTC9CQ8N5M4 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC19.43■□□□□ 0.7
TTC9CQ8N5M4 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
TTC9CQ8N5M4 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
TTC9CQ8N5M4 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC19.43■□□□□ 0.7
TTC9CQ8N5M4 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TTC9CQ8N5M4 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
TTC9CQ8N5M4 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC19.42■□□□□ 0.7
TTC9CQ8N5M4 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TTC9CQ8N5M4 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
TTC9CQ8N5M4 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC19.42■□□□□ 0.7
TTC9CQ8N5M4 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
TTC9CQ8N5M4 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC19.41■□□□□ 0.7
TTC9CQ8N5M4 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC19.41■□□□□ 0.7
TTC9CQ8N5M4 CREM-210ENST00000374721 2020 ntTSL 5 BASIC19.41■□□□□ 0.7
TTC9CQ8N5M4 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TTC9CQ8N5M4 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
TTC9CQ8N5M4 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TTC9CQ8N5M4 MIR639-201ENST00000384974 98 ntBASIC19.4■□□□□ 0.7
TTC9CQ8N5M4 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
TTC9CQ8N5M4 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
TTC9CQ8N5M4 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TTC9CQ8N5M4 AL359258.2-201ENST00000564063 1566 ntBASIC19.4■□□□□ 0.7
TTC9CQ8N5M4 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TTC9CQ8N5M4 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
TTC9CQ8N5M4 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.7
TTC9CQ8N5M4 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
TTC9CQ8N5M4 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC19.39■□□□□ 0.7
TTC9CQ8N5M4 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC19.39■□□□□ 0.69
TTC9CQ8N5M4 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC19.39■□□□□ 0.69
TTC9CQ8N5M4 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC19.39■□□□□ 0.69
TTC9CQ8N5M4 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC19.39■□□□□ 0.69
TTC9CQ8N5M4 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
TTC9CQ8N5M4 AC126177.7-201ENST00000547904 679 ntBASIC19.38■□□□□ 0.69
TTC9CQ8N5M4 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
TTC9CQ8N5M4 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC19.37■□□□□ 0.69
TTC9CQ8N5M4 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TTC9CQ8N5M4 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TTC9CQ8N5M4 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC19.36■□□□□ 0.69
TTC9CQ8N5M4 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
TTC9CQ8N5M4 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC19.36■□□□□ 0.69
TTC9CQ8N5M4 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TTC9CQ8N5M4 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC19.36■□□□□ 0.69
TTC9CQ8N5M4 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC19.36■□□□□ 0.69
TTC9CQ8N5M4 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
TTC9CQ8N5M4 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
TTC9CQ8N5M4 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 8.5 ms