Protein–RNA interactions for Protein: Q8N1N4

KRT78, Keratin, type II cytoskeletal 78, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT78Q8N1N4 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC23.84■■□□□ 1.41
KRT78Q8N1N4 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
KRT78Q8N1N4 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC23.83■■□□□ 1.41
KRT78Q8N1N4 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
KRT78Q8N1N4 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
KRT78Q8N1N4 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
KRT78Q8N1N4 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC23.82■■□□□ 1.4
KRT78Q8N1N4 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
KRT78Q8N1N4 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC23.82■■□□□ 1.4
KRT78Q8N1N4 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC23.82■■□□□ 1.4
KRT78Q8N1N4 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC23.82■■□□□ 1.4
KRT78Q8N1N4 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
KRT78Q8N1N4 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC23.82■■□□□ 1.4
KRT78Q8N1N4 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC23.82■■□□□ 1.4
KRT78Q8N1N4 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
KRT78Q8N1N4 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
KRT78Q8N1N4 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC23.81■■□□□ 1.4
KRT78Q8N1N4 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC23.8■■□□□ 1.4
KRT78Q8N1N4 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
KRT78Q8N1N4 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
KRT78Q8N1N4 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
KRT78Q8N1N4 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC23.79■■□□□ 1.4
KRT78Q8N1N4 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
KRT78Q8N1N4 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC23.79■■□□□ 1.4
KRT78Q8N1N4 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
KRT78Q8N1N4 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
KRT78Q8N1N4 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC23.78■■□□□ 1.4
KRT78Q8N1N4 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
KRT78Q8N1N4 RPS2-202ENST00000526522 924 ntTSL 2 BASIC23.78■■□□□ 1.4
KRT78Q8N1N4 AC126177.7-201ENST00000547904 679 ntBASIC23.78■■□□□ 1.4
KRT78Q8N1N4 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC23.78■■□□□ 1.4
KRT78Q8N1N4 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC23.78■■□□□ 1.4
KRT78Q8N1N4 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC23.78■■□□□ 1.4
KRT78Q8N1N4 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC23.78■■□□□ 1.4
KRT78Q8N1N4 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
KRT78Q8N1N4 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC23.77■■□□□ 1.4
KRT78Q8N1N4 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC23.77■■□□□ 1.4
KRT78Q8N1N4 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC23.77■■□□□ 1.4
KRT78Q8N1N4 AP004609.3-201ENST00000610705 1884 ntBASIC23.77■■□□□ 1.4
KRT78Q8N1N4 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.39
KRT78Q8N1N4 AL359258.2-201ENST00000564063 1566 ntBASIC23.76■■□□□ 1.39
KRT78Q8N1N4 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC23.76■■□□□ 1.39
KRT78Q8N1N4 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
KRT78Q8N1N4 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
KRT78Q8N1N4 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC23.75■■□□□ 1.39
KRT78Q8N1N4 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC23.75■■□□□ 1.39
KRT78Q8N1N4 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
KRT78Q8N1N4 PKM-203ENST00000389093 2279 ntTSL 5 BASIC23.75■■□□□ 1.39
KRT78Q8N1N4 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC23.74■■□□□ 1.39
KRT78Q8N1N4 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
KRT78Q8N1N4 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
KRT78Q8N1N4 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
KRT78Q8N1N4 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
KRT78Q8N1N4 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
KRT78Q8N1N4 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
KRT78Q8N1N4 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
KRT78Q8N1N4 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC23.74■■□□□ 1.39
KRT78Q8N1N4 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC23.74■■□□□ 1.39
KRT78Q8N1N4 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC23.74■■□□□ 1.39
KRT78Q8N1N4 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
KRT78Q8N1N4 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
KRT78Q8N1N4 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC23.74■■□□□ 1.39
KRT78Q8N1N4 AC142472.1-201ENST00000612013 1741 ntBASIC23.73■■□□□ 1.39
KRT78Q8N1N4 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
KRT78Q8N1N4 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
KRT78Q8N1N4 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
KRT78Q8N1N4 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC23.73■■□□□ 1.39
KRT78Q8N1N4 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC23.72■■□□□ 1.39
KRT78Q8N1N4 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
KRT78Q8N1N4 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
KRT78Q8N1N4 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC23.71■■□□□ 1.39
KRT78Q8N1N4 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC23.71■■□□□ 1.39
KRT78Q8N1N4 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
KRT78Q8N1N4 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC23.7■■□□□ 1.39
KRT78Q8N1N4 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.39
KRT78Q8N1N4 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC23.7■■□□□ 1.38
KRT78Q8N1N4 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
KRT78Q8N1N4 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC23.7■■□□□ 1.38
KRT78Q8N1N4 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC23.7■■□□□ 1.38
KRT78Q8N1N4 MBP-237ENST00000579129 1052 ntTSL 5 BASIC23.7■■□□□ 1.38
KRT78Q8N1N4 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
KRT78Q8N1N4 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
KRT78Q8N1N4 MED25-210ENST00000612854 801 ntTSL 5 BASIC23.69■■□□□ 1.38
KRT78Q8N1N4 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
KRT78Q8N1N4 MED25-214ENST00000622402 642 ntTSL 5 BASIC23.69■■□□□ 1.38
KRT78Q8N1N4 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
KRT78Q8N1N4 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
KRT78Q8N1N4 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
KRT78Q8N1N4 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
KRT78Q8N1N4 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
KRT78Q8N1N4 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
KRT78Q8N1N4 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC23.67■■□□□ 1.38
KRT78Q8N1N4 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC23.67■■□□□ 1.38
KRT78Q8N1N4 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
KRT78Q8N1N4 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC23.67■■□□□ 1.38
KRT78Q8N1N4 TPT1-202ENST00000379055 948 ntTSL 2 BASIC23.66■■□□□ 1.38
KRT78Q8N1N4 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC23.66■■□□□ 1.38
KRT78Q8N1N4 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
KRT78Q8N1N4 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
KRT78Q8N1N4 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Retrieved 100 of 98,524 protein–RNA pairs in 60 ms