Protein–RNA interactions for Protein: Q8IYR6

TMEFF1, Tomoregulin-1, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEFF1Q8IYR6 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC24.84■■□□□ 1.57
TMEFF1Q8IYR6 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
TMEFF1Q8IYR6 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC24.84■■□□□ 1.57
TMEFF1Q8IYR6 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC24.84■■□□□ 1.57
TMEFF1Q8IYR6 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC24.82■■□□□ 1.56
TMEFF1Q8IYR6 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC24.82■■□□□ 1.56
TMEFF1Q8IYR6 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC24.82■■□□□ 1.56
TMEFF1Q8IYR6 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC24.81■■□□□ 1.56
TMEFF1Q8IYR6 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
TMEFF1Q8IYR6 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC24.81■■□□□ 1.56
TMEFF1Q8IYR6 AC139795.1-202ENST00000500444 432 ntBASIC24.81■■□□□ 1.56
TMEFF1Q8IYR6 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
TMEFF1Q8IYR6 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
TMEFF1Q8IYR6 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
TMEFF1Q8IYR6 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC24.8■■□□□ 1.56
TMEFF1Q8IYR6 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC24.8■■□□□ 1.56
TMEFF1Q8IYR6 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
TMEFF1Q8IYR6 AC074183.2-201ENST00000623112 922 ntBASIC24.8■■□□□ 1.56
TMEFF1Q8IYR6 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC24.79■■□□□ 1.56
TMEFF1Q8IYR6 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC24.79■■□□□ 1.56
TMEFF1Q8IYR6 MIR3960-201ENST00000583311 91 ntBASIC24.79■■□□□ 1.56
TMEFF1Q8IYR6 MIR6765-201ENST00000614092 87 ntBASIC24.79■■□□□ 1.56
TMEFF1Q8IYR6 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
TMEFF1Q8IYR6 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC24.78■■□□□ 1.56
TMEFF1Q8IYR6 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC24.78■■□□□ 1.56
TMEFF1Q8IYR6 BEX3-202ENST00000372634 753 ntTSL 2 BASIC24.78■■□□□ 1.56
TMEFF1Q8IYR6 PFN2-211ENST00000489155 636 ntTSL 4 BASIC24.78■■□□□ 1.56
TMEFF1Q8IYR6 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC24.78■■□□□ 1.56
TMEFF1Q8IYR6 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
TMEFF1Q8IYR6 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC24.78■■□□□ 1.56
TMEFF1Q8IYR6 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC24.77■■□□□ 1.56
TMEFF1Q8IYR6 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
TMEFF1Q8IYR6 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC24.77■■□□□ 1.56
TMEFF1Q8IYR6 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC24.77■■□□□ 1.56
TMEFF1Q8IYR6 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC24.77■■□□□ 1.56
TMEFF1Q8IYR6 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC24.76■■□□□ 1.55
TMEFF1Q8IYR6 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC24.76■■□□□ 1.55
TMEFF1Q8IYR6 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC24.76■■□□□ 1.55
TMEFF1Q8IYR6 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
TMEFF1Q8IYR6 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
TMEFF1Q8IYR6 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
TMEFF1Q8IYR6 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC24.76■■□□□ 1.55
TMEFF1Q8IYR6 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
TMEFF1Q8IYR6 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
TMEFF1Q8IYR6 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC24.76■■□□□ 1.55
TMEFF1Q8IYR6 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
TMEFF1Q8IYR6 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC24.76■■□□□ 1.55
TMEFF1Q8IYR6 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC24.75■■□□□ 1.55
TMEFF1Q8IYR6 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
TMEFF1Q8IYR6 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
TMEFF1Q8IYR6 YBX1P4-201ENST00000392794 808 ntBASIC24.75■■□□□ 1.55
TMEFF1Q8IYR6 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC24.75■■□□□ 1.55
TMEFF1Q8IYR6 ABCB10P3-201ENST00000561950 2166 ntBASIC24.75■■□□□ 1.55
TMEFF1Q8IYR6 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC24.74■■□□□ 1.55
TMEFF1Q8IYR6 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
TMEFF1Q8IYR6 AC009299.2-201ENST00000482477 511 ntBASIC24.74■■□□□ 1.55
TMEFF1Q8IYR6 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC24.74■■□□□ 1.55
TMEFF1Q8IYR6 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC24.74■■□□□ 1.55
TMEFF1Q8IYR6 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC24.73■■□□□ 1.55
TMEFF1Q8IYR6 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC24.73■■□□□ 1.55
TMEFF1Q8IYR6 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
TMEFF1Q8IYR6 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC24.73■■□□□ 1.55
TMEFF1Q8IYR6 AC103834.1-201ENST00000520383 144 ntBASIC24.73■■□□□ 1.55
TMEFF1Q8IYR6 AC018755.3-202ENST00000596210 929 ntBASIC24.73■■□□□ 1.55
TMEFF1Q8IYR6 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC24.73■■□□□ 1.55
TMEFF1Q8IYR6 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
TMEFF1Q8IYR6 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC24.73■■□□□ 1.55
TMEFF1Q8IYR6 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC24.72■■□□□ 1.55
TMEFF1Q8IYR6 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC24.72■■□□□ 1.55
TMEFF1Q8IYR6 HYI-210ENST00000486909 905 ntTSL 5 BASIC24.72■■□□□ 1.55
TMEFF1Q8IYR6 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
TMEFF1Q8IYR6 PVT1_1.1-201ENST00000615125 194 ntBASIC24.72■■□□□ 1.55
TMEFF1Q8IYR6 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC24.72■■□□□ 1.55
TMEFF1Q8IYR6 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC24.71■■□□□ 1.55
TMEFF1Q8IYR6 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC24.71■■□□□ 1.55
TMEFF1Q8IYR6 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC24.71■■□□□ 1.55
TMEFF1Q8IYR6 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
TMEFF1Q8IYR6 AL592295.1-201ENST00000400984 884 ntBASIC24.71■■□□□ 1.55
TMEFF1Q8IYR6 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC24.71■■□□□ 1.55
TMEFF1Q8IYR6 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC24.7■■□□□ 1.55
TMEFF1Q8IYR6 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
TMEFF1Q8IYR6 AL139393.2-201ENST00000608721 2025 ntBASIC24.7■■□□□ 1.54
TMEFF1Q8IYR6 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC24.7■■□□□ 1.54
TMEFF1Q8IYR6 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
TMEFF1Q8IYR6 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC24.7■■□□□ 1.54
TMEFF1Q8IYR6 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC24.7■■□□□ 1.54
TMEFF1Q8IYR6 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC24.69■■□□□ 1.54
TMEFF1Q8IYR6 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
TMEFF1Q8IYR6 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC24.69■■□□□ 1.54
TMEFF1Q8IYR6 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC24.69■■□□□ 1.54
TMEFF1Q8IYR6 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
TMEFF1Q8IYR6 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC24.69■■□□□ 1.54
TMEFF1Q8IYR6 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC24.69■■□□□ 1.54
TMEFF1Q8IYR6 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC24.68■■□□□ 1.54
TMEFF1Q8IYR6 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
TMEFF1Q8IYR6 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC24.68■■□□□ 1.54
TMEFF1Q8IYR6 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC24.68■■□□□ 1.54
TMEFF1Q8IYR6 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
TMEFF1Q8IYR6 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
TMEFF1Q8IYR6 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
Retrieved 100 of 98,524 protein–RNA pairs in 79.5 ms