Protein–RNA interactions for Protein: Q8IV50

LYSMD2, LysM and putative peptidoglycan-binding domain-containing protein 2, humanhuman

Predictions only

Length 215 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD2Q8IV50 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
LYSMD2Q8IV50 AP002365.1-201ENST00000603448 772 ntBASIC21.71■■□□□ 1.07
LYSMD2Q8IV50 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
LYSMD2Q8IV50 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC21.7■■□□□ 1.07
LYSMD2Q8IV50 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC21.7■■□□□ 1.06
LYSMD2Q8IV50 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC21.7■■□□□ 1.06
LYSMD2Q8IV50 MED17-227ENST00000640521 2047 ntTSL 5 BASIC21.7■■□□□ 1.06
LYSMD2Q8IV50 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC21.7■■□□□ 1.06
LYSMD2Q8IV50 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
LYSMD2Q8IV50 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
LYSMD2Q8IV50 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
LYSMD2Q8IV50 AL133380.1-201ENST00000506013 324 ntBASIC21.69■■□□□ 1.06
LYSMD2Q8IV50 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
LYSMD2Q8IV50 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC21.69■■□□□ 1.06
LYSMD2Q8IV50 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
LYSMD2Q8IV50 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
LYSMD2Q8IV50 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC21.68■■□□□ 1.06
LYSMD2Q8IV50 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC21.68■■□□□ 1.06
LYSMD2Q8IV50 AL139125.2-201ENST00000623134 1869 ntBASIC21.68■■□□□ 1.06
LYSMD2Q8IV50 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
LYSMD2Q8IV50 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
LYSMD2Q8IV50 CASK-201ENST00000378154 2494 ntTSL 5 BASIC21.68■■□□□ 1.06
LYSMD2Q8IV50 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
LYSMD2Q8IV50 AC142381.3-201ENST00000568208 1670 ntBASIC21.67■■□□□ 1.06
LYSMD2Q8IV50 AC100797.4-201ENST00000631653 1827 ntBASIC21.66■■□□□ 1.06
LYSMD2Q8IV50 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
LYSMD2Q8IV50 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
LYSMD2Q8IV50 ARTN-211ENST00000498139 1303 ntAPPRIS P4 TSL 1 (best) BASIC21.66■■□□□ 1.06
LYSMD2Q8IV50 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
LYSMD2Q8IV50 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
LYSMD2Q8IV50 AP002414.2-202ENST00000590929 1450 ntBASIC21.65■■□□□ 1.06
LYSMD2Q8IV50 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
LYSMD2Q8IV50 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC21.65■■□□□ 1.06
LYSMD2Q8IV50 ARTN-201ENST00000372354 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
LYSMD2Q8IV50 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC21.64■■□□□ 1.05
LYSMD2Q8IV50 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
LYSMD2Q8IV50 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
LYSMD2Q8IV50 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC21.64■■□□□ 1.05
LYSMD2Q8IV50 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
LYSMD2Q8IV50 HRH3-201ENST00000317393 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
LYSMD2Q8IV50 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
LYSMD2Q8IV50 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC21.63■■□□□ 1.05
LYSMD2Q8IV50 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
LYSMD2Q8IV50 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
LYSMD2Q8IV50 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC21.62■■□□□ 1.05
LYSMD2Q8IV50 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
LYSMD2Q8IV50 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC21.62■■□□□ 1.05
LYSMD2Q8IV50 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC21.62■■□□□ 1.05
LYSMD2Q8IV50 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
LYSMD2Q8IV50 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
LYSMD2Q8IV50 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC21.6■■□□□ 1.05
LYSMD2Q8IV50 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
LYSMD2Q8IV50 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC21.6■■□□□ 1.05
LYSMD2Q8IV50 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC21.6■■□□□ 1.05
LYSMD2Q8IV50 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC21.6■■□□□ 1.05
LYSMD2Q8IV50 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
LYSMD2Q8IV50 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC21.59■■□□□ 1.05
LYSMD2Q8IV50 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
LYSMD2Q8IV50 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
LYSMD2Q8IV50 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC21.59■■□□□ 1.05
LYSMD2Q8IV50 MAP6D1-202ENST00000431348 890 ntAPPRIS ALT2 TSL 2 BASIC21.59■■□□□ 1.05
LYSMD2Q8IV50 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC21.59■■□□□ 1.05
LYSMD2Q8IV50 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
LYSMD2Q8IV50 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC21.59■■□□□ 1.05
LYSMD2Q8IV50 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC21.59■■□□□ 1.05
LYSMD2Q8IV50 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC21.59■■□□□ 1.05
LYSMD2Q8IV50 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
LYSMD2Q8IV50 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
LYSMD2Q8IV50 KLF16-203ENST00000592313 508 ntTSL 3 BASIC21.58■■□□□ 1.05
LYSMD2Q8IV50 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
LYSMD2Q8IV50 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC21.58■■□□□ 1.04
LYSMD2Q8IV50 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
LYSMD2Q8IV50 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
LYSMD2Q8IV50 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC21.57■■□□□ 1.04
LYSMD2Q8IV50 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC21.57■■□□□ 1.04
LYSMD2Q8IV50 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC21.57■■□□□ 1.04
LYSMD2Q8IV50 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
LYSMD2Q8IV50 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC21.56■■□□□ 1.04
LYSMD2Q8IV50 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
LYSMD2Q8IV50 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
LYSMD2Q8IV50 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
LYSMD2Q8IV50 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
LYSMD2Q8IV50 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
LYSMD2Q8IV50 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
LYSMD2Q8IV50 MAF-203ENST00000569649 1217 ntAPPRIS ALT2 TSL 5 BASIC21.55■■□□□ 1.04
LYSMD2Q8IV50 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
LYSMD2Q8IV50 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
LYSMD2Q8IV50 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC21.55■■□□□ 1.04
LYSMD2Q8IV50 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
LYSMD2Q8IV50 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
LYSMD2Q8IV50 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC21.54■■□□□ 1.04
LYSMD2Q8IV50 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
LYSMD2Q8IV50 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
LYSMD2Q8IV50 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
LYSMD2Q8IV50 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC21.54■■□□□ 1.04
LYSMD2Q8IV50 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
LYSMD2Q8IV50 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
LYSMD2Q8IV50 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC21.54■■□□□ 1.04
LYSMD2Q8IV50 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
LYSMD2Q8IV50 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC21.53■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 10.8 ms