Protein–RNA interactions for Protein: Q86X40

LRRC28, Leucine-rich repeat-containing protein 28, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28Q86X40 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.09
LRRC28Q86X40 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC21.83■■□□□ 1.09
LRRC28Q86X40 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
LRRC28Q86X40 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC21.82■■□□□ 1.08
LRRC28Q86X40 DUSP8P4-201ENST00000399538 1761 ntBASIC21.82■■□□□ 1.08
LRRC28Q86X40 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC21.82■■□□□ 1.08
LRRC28Q86X40 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC21.82■■□□□ 1.08
LRRC28Q86X40 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC21.82■■□□□ 1.08
LRRC28Q86X40 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
LRRC28Q86X40 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC21.81■■□□□ 1.08
LRRC28Q86X40 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
LRRC28Q86X40 PVT1-219ENST00000523427 938 ntTSL 3 BASIC21.81■■□□□ 1.08
LRRC28Q86X40 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
LRRC28Q86X40 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
LRRC28Q86X40 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC21.8■■□□□ 1.08
LRRC28Q86X40 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC21.8■■□□□ 1.08
LRRC28Q86X40 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
LRRC28Q86X40 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
LRRC28Q86X40 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC21.79■■□□□ 1.08
LRRC28Q86X40 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC21.79■■□□□ 1.08
LRRC28Q86X40 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
LRRC28Q86X40 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC21.79■■□□□ 1.08
LRRC28Q86X40 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
LRRC28Q86X40 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
LRRC28Q86X40 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC21.78■■□□□ 1.08
LRRC28Q86X40 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
LRRC28Q86X40 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
LRRC28Q86X40 LINC01971-201ENST00000617888 1048 ntBASIC21.78■■□□□ 1.08
LRRC28Q86X40 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
LRRC28Q86X40 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
LRRC28Q86X40 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC21.77■■□□□ 1.08
LRRC28Q86X40 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
LRRC28Q86X40 CALM3-209ENST00000597743 577 ntTSL 4 BASIC21.77■■□□□ 1.08
LRRC28Q86X40 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
LRRC28Q86X40 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
LRRC28Q86X40 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
LRRC28Q86X40 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
LRRC28Q86X40 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
LRRC28Q86X40 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
LRRC28Q86X40 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
LRRC28Q86X40 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
LRRC28Q86X40 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC21.76■■□□□ 1.07
LRRC28Q86X40 AC092803.2-201ENST00000564287 1899 ntBASIC21.75■■□□□ 1.07
LRRC28Q86X40 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC21.75■■□□□ 1.07
LRRC28Q86X40 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
LRRC28Q86X40 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
LRRC28Q86X40 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
LRRC28Q86X40 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
LRRC28Q86X40 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC21.73■■□□□ 1.07
LRRC28Q86X40 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
LRRC28Q86X40 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
LRRC28Q86X40 LINC00273-201ENST00000539813 1452 ntBASIC21.73■■□□□ 1.07
LRRC28Q86X40 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC21.73■■□□□ 1.07
LRRC28Q86X40 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
LRRC28Q86X40 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
LRRC28Q86X40 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
LRRC28Q86X40 AC018358.1-201ENST00000631079 1402 ntBASIC21.72■■□□□ 1.07
LRRC28Q86X40 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
LRRC28Q86X40 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
LRRC28Q86X40 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
LRRC28Q86X40 DUX4L11-201ENST00000611504 1267 ntBASIC21.72■■□□□ 1.07
LRRC28Q86X40 DUX4L12-201ENST00000614593 1267 ntBASIC21.72■■□□□ 1.07
LRRC28Q86X40 DUX4L14-201ENST00000621227 1267 ntBASIC21.72■■□□□ 1.07
LRRC28Q86X40 LTK-203ENST00000453182 2412 ntTSL 2 BASIC21.72■■□□□ 1.07
LRRC28Q86X40 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC21.72■■□□□ 1.07
LRRC28Q86X40 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
LRRC28Q86X40 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC21.71■■□□□ 1.07
LRRC28Q86X40 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
LRRC28Q86X40 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC21.71■■□□□ 1.07
LRRC28Q86X40 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
LRRC28Q86X40 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC21.7■■□□□ 1.07
LRRC28Q86X40 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
LRRC28Q86X40 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC21.7■■□□□ 1.06
LRRC28Q86X40 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC21.7■■□□□ 1.06
LRRC28Q86X40 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC21.7■■□□□ 1.06
LRRC28Q86X40 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC21.7■■□□□ 1.06
LRRC28Q86X40 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC21.69■■□□□ 1.06
LRRC28Q86X40 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC21.69■■□□□ 1.06
LRRC28Q86X40 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC21.69■■□□□ 1.06
LRRC28Q86X40 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC21.69■■□□□ 1.06
LRRC28Q86X40 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
LRRC28Q86X40 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC21.69■■□□□ 1.06
LRRC28Q86X40 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC21.69■■□□□ 1.06
LRRC28Q86X40 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
LRRC28Q86X40 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
LRRC28Q86X40 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC21.68■■□□□ 1.06
LRRC28Q86X40 MACF1-219ENST00000484793 834 ntTSL 2 BASIC21.68■■□□□ 1.06
LRRC28Q86X40 RNF166-209ENST00000567844 633 ntTSL 5 BASIC21.68■■□□□ 1.06
LRRC28Q86X40 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
LRRC28Q86X40 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
LRRC28Q86X40 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
LRRC28Q86X40 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
LRRC28Q86X40 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC21.68■■□□□ 1.06
LRRC28Q86X40 AGPS-202ENST00000409888 815 ntTSL 4 BASIC21.67■■□□□ 1.06
LRRC28Q86X40 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC21.67■■□□□ 1.06
LRRC28Q86X40 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
LRRC28Q86X40 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
LRRC28Q86X40 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC21.66■■□□□ 1.06
LRRC28Q86X40 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
LRRC28Q86X40 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC21.66■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 41.9 ms