Protein–RNA interactions for Protein: Q70E73

RAPH1, Ras-associated and pleckstrin homology domains-containing protein 1, humanhuman

Predictions only

Length 1,250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPH1Q70E73 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC24.63■■□□□ 1.53
RAPH1Q70E73 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC24.62■■□□□ 1.53
RAPH1Q70E73 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC24.62■■□□□ 1.53
RAPH1Q70E73 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC24.61■■□□□ 1.53
RAPH1Q70E73 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
RAPH1Q70E73 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC24.61■■□□□ 1.53
RAPH1Q70E73 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
RAPH1Q70E73 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
RAPH1Q70E73 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
RAPH1Q70E73 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
RAPH1Q70E73 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC24.6■■□□□ 1.53
RAPH1Q70E73 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
RAPH1Q70E73 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC24.6■■□□□ 1.53
RAPH1Q70E73 AC145676.1-201ENST00000514988 2004 ntBASIC24.59■■□□□ 1.53
RAPH1Q70E73 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC24.59■■□□□ 1.53
RAPH1Q70E73 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC24.59■■□□□ 1.53
RAPH1Q70E73 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC24.59■■□□□ 1.53
RAPH1Q70E73 WHAMMP3-201ENST00000611636 1609 ntBASIC24.59■■□□□ 1.53
RAPH1Q70E73 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC24.58■■□□□ 1.53
RAPH1Q70E73 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.52
RAPH1Q70E73 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.52
RAPH1Q70E73 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC24.58■■□□□ 1.52
RAPH1Q70E73 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
RAPH1Q70E73 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC24.57■■□□□ 1.52
RAPH1Q70E73 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
RAPH1Q70E73 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
RAPH1Q70E73 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
RAPH1Q70E73 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC24.56■■□□□ 1.52
RAPH1Q70E73 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC24.56■■□□□ 1.52
RAPH1Q70E73 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
RAPH1Q70E73 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
RAPH1Q70E73 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
RAPH1Q70E73 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC24.56■■□□□ 1.52
RAPH1Q70E73 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC24.55■■□□□ 1.52
RAPH1Q70E73 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
RAPH1Q70E73 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC24.55■■□□□ 1.52
RAPH1Q70E73 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC24.55■■□□□ 1.52
RAPH1Q70E73 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
RAPH1Q70E73 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
RAPH1Q70E73 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
RAPH1Q70E73 AC142472.1-201ENST00000612013 1741 ntBASIC24.54■■□□□ 1.52
RAPH1Q70E73 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC24.54■■□□□ 1.52
RAPH1Q70E73 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
RAPH1Q70E73 AC092803.2-201ENST00000564287 1899 ntBASIC24.53■■□□□ 1.52
RAPH1Q70E73 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC24.53■■□□□ 1.52
RAPH1Q70E73 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
RAPH1Q70E73 RPS2-210ENST00000530225 765 ntTSL 2 BASIC24.52■■□□□ 1.52
RAPH1Q70E73 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
RAPH1Q70E73 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
RAPH1Q70E73 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
RAPH1Q70E73 RPS2P35-201ENST00000443417 897 ntBASIC24.51■■□□□ 1.51
RAPH1Q70E73 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC24.51■■□□□ 1.51
RAPH1Q70E73 HGH1-207ENST00000628266 258 ntTSL 5 BASIC24.51■■□□□ 1.51
RAPH1Q70E73 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
RAPH1Q70E73 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
RAPH1Q70E73 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC24.5■■□□□ 1.51
RAPH1Q70E73 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
RAPH1Q70E73 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC24.5■■□□□ 1.51
RAPH1Q70E73 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
RAPH1Q70E73 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
RAPH1Q70E73 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC24.49■■□□□ 1.51
RAPH1Q70E73 CHML-204ENST00000638121 920 ntTSL 2 BASIC24.49■■□□□ 1.51
RAPH1Q70E73 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC24.48■■□□□ 1.51
RAPH1Q70E73 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC24.48■■□□□ 1.51
RAPH1Q70E73 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC24.48■■□□□ 1.51
RAPH1Q70E73 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC24.48■■□□□ 1.51
RAPH1Q70E73 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC24.48■■□□□ 1.51
RAPH1Q70E73 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC24.47■■□□□ 1.51
RAPH1Q70E73 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
RAPH1Q70E73 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC24.47■■□□□ 1.51
RAPH1Q70E73 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
RAPH1Q70E73 LINC01971-201ENST00000617888 1048 ntBASIC24.46■■□□□ 1.51
RAPH1Q70E73 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
RAPH1Q70E73 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.51
RAPH1Q70E73 DUSP8P4-201ENST00000399538 1761 ntBASIC24.45■■□□□ 1.5
RAPH1Q70E73 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
RAPH1Q70E73 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
RAPH1Q70E73 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC24.45■■□□□ 1.5
RAPH1Q70E73 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
RAPH1Q70E73 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
RAPH1Q70E73 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC24.45■■□□□ 1.5
RAPH1Q70E73 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
RAPH1Q70E73 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
RAPH1Q70E73 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
RAPH1Q70E73 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC24.44■■□□□ 1.5
RAPH1Q70E73 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC24.43■■□□□ 1.5
RAPH1Q70E73 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
RAPH1Q70E73 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC24.43■■□□□ 1.5
RAPH1Q70E73 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC24.43■■□□□ 1.5
RAPH1Q70E73 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC24.43■■□□□ 1.5
RAPH1Q70E73 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC24.43■■□□□ 1.5
RAPH1Q70E73 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
RAPH1Q70E73 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
RAPH1Q70E73 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
RAPH1Q70E73 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC24.42■■□□□ 1.5
RAPH1Q70E73 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC24.42■■□□□ 1.5
RAPH1Q70E73 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC24.42■■□□□ 1.5
RAPH1Q70E73 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC24.42■■□□□ 1.5
RAPH1Q70E73 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
RAPH1Q70E73 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC24.42■■□□□ 1.5
Retrieved 100 of 98,524 protein–RNA pairs in 69.5 ms