Protein–RNA interactions for Protein: Q52M75

LINC01554, Putative uncharacterized protein encoded by LINC01554, humanhuman

Predictions only

Length 96 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01554Q52M75 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC12.33□□□□□ -0.43
LINC01554Q52M75 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
LINC01554Q52M75 SYNGR1-202ENST00000318801 1361 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
LINC01554Q52M75 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
LINC01554Q52M75 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
LINC01554Q52M75 MPST-201ENST00000341116 1504 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
LINC01554Q52M75 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
LINC01554Q52M75 AGTRAP-204ENST00000376637 1067 ntTSL 2 BASIC12.33□□□□□ -0.44
LINC01554Q52M75 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
LINC01554Q52M75 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
LINC01554Q52M75 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
LINC01554Q52M75 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
LINC01554Q52M75 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC12.33□□□□□ -0.44
LINC01554Q52M75 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
LINC01554Q52M75 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
LINC01554Q52M75 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
LINC01554Q52M75 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
LINC01554Q52M75 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
LINC01554Q52M75 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
LINC01554Q52M75 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC12.32□□□□□ -0.44
LINC01554Q52M75 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
LINC01554Q52M75 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
LINC01554Q52M75 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
LINC01554Q52M75 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC12.32□□□□□ -0.44
LINC01554Q52M75 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC12.32□□□□□ -0.44
LINC01554Q52M75 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
LINC01554Q52M75 MAPK1-202ENST00000398822 1487 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
LINC01554Q52M75 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
LINC01554Q52M75 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
LINC01554Q52M75 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
LINC01554Q52M75 C9orf163-202ENST00000624034 2573 ntBASIC12.31□□□□□ -0.44
LINC01554Q52M75 RASSF7-201ENST00000397582 1731 ntAPPRIS ALT2 TSL 2 BASIC12.31□□□□□ -0.44
LINC01554Q52M75 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC12.31□□□□□ -0.44
LINC01554Q52M75 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
LINC01554Q52M75 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
LINC01554Q52M75 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
LINC01554Q52M75 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
LINC01554Q52M75 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
LINC01554Q52M75 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
LINC01554Q52M75 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC12.31□□□□□ -0.44
LINC01554Q52M75 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
LINC01554Q52M75 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
LINC01554Q52M75 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC12.31□□□□□ -0.44
LINC01554Q52M75 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
LINC01554Q52M75 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC12.3□□□□□ -0.44
LINC01554Q52M75 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
LINC01554Q52M75 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
LINC01554Q52M75 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
LINC01554Q52M75 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC12.3□□□□□ -0.44
LINC01554Q52M75 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC12.3□□□□□ -0.44
LINC01554Q52M75 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
LINC01554Q52M75 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
LINC01554Q52M75 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
LINC01554Q52M75 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
LINC01554Q52M75 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
LINC01554Q52M75 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
LINC01554Q52M75 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
LINC01554Q52M75 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC12.29□□□□□ -0.44
LINC01554Q52M75 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
LINC01554Q52M75 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
LINC01554Q52M75 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
LINC01554Q52M75 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
LINC01554Q52M75 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
LINC01554Q52M75 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
LINC01554Q52M75 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC12.28□□□□□ -0.44
LINC01554Q52M75 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC12.28□□□□□ -0.44
LINC01554Q52M75 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
LINC01554Q52M75 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC12.28□□□□□ -0.44
LINC01554Q52M75 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
LINC01554Q52M75 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
LINC01554Q52M75 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
LINC01554Q52M75 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
LINC01554Q52M75 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
LINC01554Q52M75 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC12.28□□□□□ -0.44
LINC01554Q52M75 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC12.27□□□□□ -0.44
LINC01554Q52M75 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
LINC01554Q52M75 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
LINC01554Q52M75 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
LINC01554Q52M75 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.44
LINC01554Q52M75 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
LINC01554Q52M75 HNRNPAB-207ENST00000514633 1571 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.44
LINC01554Q52M75 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
LINC01554Q52M75 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC12.27□□□□□ -0.45
LINC01554Q52M75 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
LINC01554Q52M75 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC12.27□□□□□ -0.45
LINC01554Q52M75 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
LINC01554Q52M75 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
LINC01554Q52M75 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
LINC01554Q52M75 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC12.27□□□□□ -0.45
LINC01554Q52M75 COPS6-201ENST00000303904 1432 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
LINC01554Q52M75 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
LINC01554Q52M75 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC12.27□□□□□ -0.45
LINC01554Q52M75 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
LINC01554Q52M75 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
LINC01554Q52M75 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
LINC01554Q52M75 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
LINC01554Q52M75 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
LINC01554Q52M75 LINC01578-203ENST00000554669 578 ntTSL 5 BASIC12.26□□□□□ -0.45
LINC01554Q52M75 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
LINC01554Q52M75 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms