Protein–RNA interactions for Protein: Q02985

CFHR3, Complement factor H-related protein 3, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFHR3Q02985 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CFHR3Q02985 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC19.42■□□□□ 0.7
CFHR3Q02985 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
CFHR3Q02985 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
CFHR3Q02985 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CFHR3Q02985 ECEL1P2-201ENST00000461596 1295 ntBASIC19.41■□□□□ 0.7
CFHR3Q02985 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CFHR3Q02985 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
CFHR3Q02985 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CFHR3Q02985 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CFHR3Q02985 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
CFHR3Q02985 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CFHR3Q02985 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CFHR3Q02985 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
CFHR3Q02985 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
CFHR3Q02985 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC19.4■□□□□ 0.7
CFHR3Q02985 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC19.4■□□□□ 0.7
CFHR3Q02985 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.7
CFHR3Q02985 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CFHR3Q02985 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CFHR3Q02985 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
CFHR3Q02985 SHF-208ENST00000560734 1731 ntTSL 3 BASIC19.39■□□□□ 0.69
CFHR3Q02985 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
CFHR3Q02985 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
CFHR3Q02985 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC19.38■□□□□ 0.69
CFHR3Q02985 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC19.38■□□□□ 0.69
CFHR3Q02985 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC19.38■□□□□ 0.69
CFHR3Q02985 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CFHR3Q02985 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CFHR3Q02985 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CFHR3Q02985 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC19.37■□□□□ 0.69
CFHR3Q02985 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC19.37■□□□□ 0.69
CFHR3Q02985 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC19.37■□□□□ 0.69
CFHR3Q02985 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
CFHR3Q02985 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CFHR3Q02985 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC19.36■□□□□ 0.69
CFHR3Q02985 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CFHR3Q02985 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CFHR3Q02985 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CFHR3Q02985 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CFHR3Q02985 AL449106.1-201ENST00000608517 1980 ntBASIC19.35■□□□□ 0.69
CFHR3Q02985 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
CFHR3Q02985 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CFHR3Q02985 AC025884.2-201ENST00000553429 711 ntBASIC19.34■□□□□ 0.69
CFHR3Q02985 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CFHR3Q02985 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC19.33■□□□□ 0.69
CFHR3Q02985 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC19.33■□□□□ 0.69
CFHR3Q02985 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CFHR3Q02985 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
CFHR3Q02985 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC19.33■□□□□ 0.68
CFHR3Q02985 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC19.33■□□□□ 0.68
CFHR3Q02985 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC19.33■□□□□ 0.68
CFHR3Q02985 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
CFHR3Q02985 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
CFHR3Q02985 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CFHR3Q02985 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC19.32■□□□□ 0.68
CFHR3Q02985 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CFHR3Q02985 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC19.32■□□□□ 0.68
CFHR3Q02985 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CFHR3Q02985 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CFHR3Q02985 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC19.32■□□□□ 0.68
CFHR3Q02985 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
CFHR3Q02985 ABHD17AP5-201ENST00000580133 923 ntBASIC19.31■□□□□ 0.68
CFHR3Q02985 REST-210ENST00000638187 1334 ntTSL 5 BASIC19.3■□□□□ 0.68
CFHR3Q02985 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CFHR3Q02985 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CFHR3Q02985 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC19.3■□□□□ 0.68
CFHR3Q02985 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC19.3■□□□□ 0.68
CFHR3Q02985 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CFHR3Q02985 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CFHR3Q02985 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CFHR3Q02985 AL359504.2-201ENST00000605506 1601 ntBASIC19.29■□□□□ 0.68
CFHR3Q02985 SMPD5-203ENST00000639008 1464 ntBASIC19.29■□□□□ 0.68
CFHR3Q02985 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CFHR3Q02985 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CFHR3Q02985 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC19.29■□□□□ 0.68
CFHR3Q02985 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CFHR3Q02985 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CFHR3Q02985 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CFHR3Q02985 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC19.28■□□□□ 0.68
CFHR3Q02985 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CFHR3Q02985 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC19.28■□□□□ 0.68
CFHR3Q02985 AC007029.1-201ENST00000604183 313 ntBASIC19.28■□□□□ 0.68
CFHR3Q02985 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CFHR3Q02985 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
CFHR3Q02985 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CFHR3Q02985 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC19.27■□□□□ 0.68
CFHR3Q02985 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
CFHR3Q02985 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC19.27■□□□□ 0.68
CFHR3Q02985 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.67
CFHR3Q02985 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC19.26■□□□□ 0.67
CFHR3Q02985 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC19.26■□□□□ 0.67
CFHR3Q02985 PFN2-211ENST00000489155 636 ntTSL 4 BASIC19.25■□□□□ 0.67
CFHR3Q02985 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CFHR3Q02985 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CFHR3Q02985 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CFHR3Q02985 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
CFHR3Q02985 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CFHR3Q02985 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
CFHR3Q02985 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 13.1 ms