Protein–RNA interactions for Protein: P78423

CX3CL1, Fractalkine, humanhuman

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1P78423 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
CX3CL1P78423 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
CX3CL1P78423 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CX3CL1P78423 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC19.78■□□□□ 0.76
CX3CL1P78423 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
CX3CL1P78423 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CX3CL1P78423 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC19.78■□□□□ 0.76
CX3CL1P78423 MIR639-201ENST00000384974 98 ntBASIC19.78■□□□□ 0.76
CX3CL1P78423 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CX3CL1P78423 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CX3CL1P78423 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
CX3CL1P78423 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CX3CL1P78423 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CX3CL1P78423 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
CX3CL1P78423 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC19.78■□□□□ 0.76
CX3CL1P78423 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
CX3CL1P78423 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
CX3CL1P78423 RPS2-202ENST00000526522 924 ntTSL 2 BASIC19.77■□□□□ 0.76
CX3CL1P78423 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC19.77■□□□□ 0.76
CX3CL1P78423 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC19.77■□□□□ 0.76
CX3CL1P78423 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.75
CX3CL1P78423 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC19.77■□□□□ 0.75
CX3CL1P78423 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
CX3CL1P78423 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC19.76■□□□□ 0.75
CX3CL1P78423 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
CX3CL1P78423 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
CX3CL1P78423 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CX3CL1P78423 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CX3CL1P78423 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
CX3CL1P78423 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC19.75■□□□□ 0.75
CX3CL1P78423 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CX3CL1P78423 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
CX3CL1P78423 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC19.75■□□□□ 0.75
CX3CL1P78423 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC19.75■□□□□ 0.75
CX3CL1P78423 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC19.75■□□□□ 0.75
CX3CL1P78423 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
CX3CL1P78423 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CX3CL1P78423 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CX3CL1P78423 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
CX3CL1P78423 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC19.74■□□□□ 0.75
CX3CL1P78423 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CX3CL1P78423 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC19.74■□□□□ 0.75
CX3CL1P78423 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CX3CL1P78423 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CX3CL1P78423 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC19.73■□□□□ 0.75
CX3CL1P78423 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
CX3CL1P78423 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
CX3CL1P78423 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CX3CL1P78423 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CX3CL1P78423 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
CX3CL1P78423 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC19.73■□□□□ 0.75
CX3CL1P78423 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
CX3CL1P78423 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CX3CL1P78423 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CX3CL1P78423 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC19.72■□□□□ 0.75
CX3CL1P78423 MBP-237ENST00000579129 1052 ntTSL 5 BASIC19.72■□□□□ 0.75
CX3CL1P78423 WHAMMP3-201ENST00000611636 1609 ntBASIC19.72■□□□□ 0.75
CX3CL1P78423 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CX3CL1P78423 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
CX3CL1P78423 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
CX3CL1P78423 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CX3CL1P78423 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CX3CL1P78423 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CX3CL1P78423 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC19.71■□□□□ 0.75
CX3CL1P78423 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC19.7■□□□□ 0.74
CX3CL1P78423 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC19.7■□□□□ 0.74
CX3CL1P78423 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CX3CL1P78423 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
CX3CL1P78423 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CX3CL1P78423 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CX3CL1P78423 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
CX3CL1P78423 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
CX3CL1P78423 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CX3CL1P78423 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CX3CL1P78423 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CX3CL1P78423 AL449106.1-201ENST00000608517 1980 ntBASIC19.7■□□□□ 0.74
CX3CL1P78423 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
CX3CL1P78423 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC19.69■□□□□ 0.74
CX3CL1P78423 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CX3CL1P78423 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC19.69■□□□□ 0.74
CX3CL1P78423 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CX3CL1P78423 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CX3CL1P78423 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC19.68■□□□□ 0.74
CX3CL1P78423 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CX3CL1P78423 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC19.68■□□□□ 0.74
CX3CL1P78423 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CX3CL1P78423 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC19.68■□□□□ 0.74
CX3CL1P78423 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CX3CL1P78423 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC19.67■□□□□ 0.74
CX3CL1P78423 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC19.67■□□□□ 0.74
CX3CL1P78423 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
CX3CL1P78423 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CX3CL1P78423 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
CX3CL1P78423 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
CX3CL1P78423 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
CX3CL1P78423 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CX3CL1P78423 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
CX3CL1P78423 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CX3CL1P78423 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CX3CL1P78423 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 12.9 ms