Protein–RNA interactions for Protein: P78334

GABRE, Gamma-aminobutyric acid receptor subunit epsilon, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABREP78334 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC23.75■■□□□ 1.39
GABREP78334 MIR6765-201ENST00000614092 87 ntBASIC23.75■■□□□ 1.39
GABREP78334 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC23.75■■□□□ 1.39
GABREP78334 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
GABREP78334 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
GABREP78334 BEX3-202ENST00000372634 753 ntTSL 2 BASIC23.74■■□□□ 1.39
GABREP78334 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC23.74■■□□□ 1.39
GABREP78334 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
GABREP78334 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC23.74■■□□□ 1.39
GABREP78334 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC23.74■■□□□ 1.39
GABREP78334 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC23.73■■□□□ 1.39
GABREP78334 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC23.73■■□□□ 1.39
GABREP78334 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
GABREP78334 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC23.73■■□□□ 1.39
GABREP78334 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC23.73■■□□□ 1.39
GABREP78334 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
GABREP78334 HYI-210ENST00000486909 905 ntTSL 5 BASIC23.72■■□□□ 1.39
GABREP78334 MIR3960-201ENST00000583311 91 ntBASIC23.72■■□□□ 1.39
GABREP78334 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC23.72■■□□□ 1.39
GABREP78334 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC23.71■■□□□ 1.39
GABREP78334 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC23.71■■□□□ 1.39
GABREP78334 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
GABREP78334 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC23.71■■□□□ 1.39
GABREP78334 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
GABREP78334 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
GABREP78334 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC23.71■■□□□ 1.39
GABREP78334 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC23.71■■□□□ 1.39
GABREP78334 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
GABREP78334 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC23.7■■□□□ 1.38
GABREP78334 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
GABREP78334 MTURN-203ENST00000409688 843 ntTSL 2 BASIC23.7■■□□□ 1.38
GABREP78334 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
GABREP78334 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC23.7■■□□□ 1.38
GABREP78334 AC131212.1-201ENST00000613771 668 ntBASIC23.7■■□□□ 1.38
GABREP78334 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
GABREP78334 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC23.69■■□□□ 1.38
GABREP78334 PFN2-211ENST00000489155 636 ntTSL 4 BASIC23.69■■□□□ 1.38
GABREP78334 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC23.69■■□□□ 1.38
GABREP78334 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC23.69■■□□□ 1.38
GABREP78334 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC23.68■■□□□ 1.38
GABREP78334 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC23.68■■□□□ 1.38
GABREP78334 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
GABREP78334 AC018755.3-202ENST00000596210 929 ntBASIC23.68■■□□□ 1.38
GABREP78334 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC23.67■■□□□ 1.38
GABREP78334 AC019069.1-201ENST00000610008 1333 ntBASIC23.67■■□□□ 1.38
GABREP78334 HES6-204ENST00000409182 863 ntTSL 2 BASIC23.67■■□□□ 1.38
GABREP78334 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC23.67■■□□□ 1.38
GABREP78334 AC103834.1-201ENST00000520383 144 ntBASIC23.67■■□□□ 1.38
GABREP78334 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC23.67■■□□□ 1.38
GABREP78334 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
GABREP78334 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
GABREP78334 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
GABREP78334 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC23.65■■□□□ 1.38
GABREP78334 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC23.65■■□□□ 1.38
GABREP78334 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC23.64■■□□□ 1.38
GABREP78334 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
GABREP78334 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
GABREP78334 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC23.64■■□□□ 1.37
GABREP78334 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC23.64■■□□□ 1.37
GABREP78334 PVT1_1.1-201ENST00000615125 194 ntBASIC23.64■■□□□ 1.37
GABREP78334 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC23.64■■□□□ 1.37
GABREP78334 ST7-AS1-201ENST00000456775 1889 ntBASIC23.64■■□□□ 1.37
GABREP78334 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC23.63■■□□□ 1.37
GABREP78334 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
GABREP78334 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
GABREP78334 THA1P-201ENST00000590384 1145 ntBASIC23.62■■□□□ 1.37
GABREP78334 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
GABREP78334 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC23.62■■□□□ 1.37
GABREP78334 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
GABREP78334 GUSBP5-201ENST00000418136 578 ntBASIC23.61■■□□□ 1.37
GABREP78334 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
GABREP78334 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC23.61■■□□□ 1.37
GABREP78334 ABCB10P1-201ENST00000614297 2181 ntBASIC23.6■■□□□ 1.37
GABREP78334 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC23.6■■□□□ 1.37
GABREP78334 OR2A1-AS1-204ENST00000470435 602 ntBASIC23.6■■□□□ 1.37
GABREP78334 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC23.6■■□□□ 1.37
GABREP78334 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC23.59■■□□□ 1.37
GABREP78334 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
GABREP78334 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC23.59■■□□□ 1.37
GABREP78334 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC23.59■■□□□ 1.37
GABREP78334 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC23.59■■□□□ 1.37
GABREP78334 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC23.59■■□□□ 1.37
GABREP78334 MIR4508-201ENST00000584178 70 ntBASIC23.59■■□□□ 1.37
GABREP78334 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC23.59■■□□□ 1.37
GABREP78334 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
GABREP78334 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC23.58■■□□□ 1.37
GABREP78334 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.36
GABREP78334 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC23.58■■□□□ 1.36
GABREP78334 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC23.57■■□□□ 1.36
GABREP78334 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC23.57■■□□□ 1.36
GABREP78334 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC23.57■■□□□ 1.36
GABREP78334 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC23.57■■□□□ 1.36
GABREP78334 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
GABREP78334 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
GABREP78334 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC23.56■■□□□ 1.36
GABREP78334 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC23.56■■□□□ 1.36
GABREP78334 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC23.56■■□□□ 1.36
GABREP78334 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC23.55■■□□□ 1.36
GABREP78334 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC23.55■■□□□ 1.36
GABREP78334 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms