Protein–RNA interactions for Protein: P61129

ZC3H6, Zinc finger CCCH domain-containing protein 6, humanhuman

Known RBP Predictions only

Length 1,189 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H6P61129 MIR6765-201ENST00000614092 87 ntBASIC33.75■■■□□ 2.99
ZC3H6P61129 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC33.75■■■□□ 2.99
ZC3H6P61129 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC33.73■■■□□ 2.99
ZC3H6P61129 YBX1P4-201ENST00000392794 808 ntBASIC33.73■■■□□ 2.99
ZC3H6P61129 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC33.73■■■□□ 2.99
ZC3H6P61129 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC33.73■■■□□ 2.99
ZC3H6P61129 AC008105.3-203ENST00000591365 2238 ntTSL 2 BASIC33.72■■■□□ 2.99
ZC3H6P61129 AC131212.1-201ENST00000613771 668 ntBASIC33.72■■■□□ 2.99
ZC3H6P61129 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC33.72■■■□□ 2.99
ZC3H6P61129 PFN2-211ENST00000489155 636 ntTSL 4 BASIC33.71■■■□□ 2.99
ZC3H6P61129 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC33.71■■■□□ 2.99
ZC3H6P61129 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC33.7■■■□□ 2.99
ZC3H6P61129 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC33.7■■■□□ 2.99
ZC3H6P61129 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC33.69■■■□□ 2.98
ZC3H6P61129 HES6-204ENST00000409182 863 ntTSL 2 BASIC33.69■■■□□ 2.98
ZC3H6P61129 MIR3960-201ENST00000583311 91 ntBASIC33.69■■■□□ 2.98
ZC3H6P61129 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC33.68■■■□□ 2.98
ZC3H6P61129 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC33.68■■■□□ 2.98
ZC3H6P61129 AC019069.1-201ENST00000610008 1333 ntBASIC33.68■■■□□ 2.98
ZC3H6P61129 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC33.68■■■□□ 2.98
ZC3H6P61129 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC33.68■■■□□ 2.98
ZC3H6P61129 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC33.67■■■□□ 2.98
ZC3H6P61129 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC33.67■■■□□ 2.98
ZC3H6P61129 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC33.67■■■□□ 2.98
ZC3H6P61129 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC33.67■■■□□ 2.98
ZC3H6P61129 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC33.66■■■□□ 2.98
ZC3H6P61129 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC33.66■■■□□ 2.98
ZC3H6P61129 THA1P-201ENST00000590384 1145 ntBASIC33.66■■■□□ 2.98
ZC3H6P61129 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC33.66■■■□□ 2.98
ZC3H6P61129 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC33.65■■■□□ 2.98
ZC3H6P61129 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC33.65■■■□□ 2.98
ZC3H6P61129 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC33.65■■■□□ 2.98
ZC3H6P61129 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC33.64■■■□□ 2.98
ZC3H6P61129 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC33.64■■■□□ 2.98
ZC3H6P61129 GUSBP5-201ENST00000418136 578 ntBASIC33.64■■■□□ 2.98
ZC3H6P61129 OR2A1-AS1-204ENST00000470435 602 ntBASIC33.64■■■□□ 2.98
ZC3H6P61129 AC018755.3-202ENST00000596210 929 ntBASIC33.64■■■□□ 2.98
ZC3H6P61129 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC33.64■■■□□ 2.98
ZC3H6P61129 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC33.63■■■□□ 2.97
ZC3H6P61129 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC33.63■■■□□ 2.97
ZC3H6P61129 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC33.63■■■□□ 2.97
ZC3H6P61129 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC33.62■■■□□ 2.97
ZC3H6P61129 HYI-210ENST00000486909 905 ntTSL 5 BASIC33.62■■■□□ 2.97
ZC3H6P61129 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC33.62■■■□□ 2.97
ZC3H6P61129 UBP1-201ENST00000283628 2074 ntAPPRIS P3 TSL 2 BASIC33.61■■■□□ 2.97
ZC3H6P61129 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC33.6■■■□□ 2.97
ZC3H6P61129 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC33.6■■■□□ 2.97
ZC3H6P61129 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC33.6■■■□□ 2.97
ZC3H6P61129 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC33.6■■■□□ 2.97
ZC3H6P61129 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC33.6■■■□□ 2.97
ZC3H6P61129 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC33.59■■■□□ 2.97
ZC3H6P61129 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC33.59■■■□□ 2.97
ZC3H6P61129 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC33.59■■■□□ 2.97
ZC3H6P61129 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC33.58■■■□□ 2.97
ZC3H6P61129 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC33.58■■■□□ 2.97
ZC3H6P61129 MIR4508-201ENST00000584178 70 ntBASIC33.58■■■□□ 2.97
ZC3H6P61129 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC33.58■■■□□ 2.97
ZC3H6P61129 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC33.58■■■□□ 2.97
ZC3H6P61129 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC33.57■■■□□ 2.96
ZC3H6P61129 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC33.57■■■□□ 2.96
ZC3H6P61129 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC33.57■■■□□ 2.96
ZC3H6P61129 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC33.57■■■□□ 2.96
ZC3H6P61129 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC33.56■■■□□ 2.96
ZC3H6P61129 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC33.56■■■□□ 2.96
ZC3H6P61129 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC33.56■■■□□ 2.96
ZC3H6P61129 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC33.56■■■□□ 2.96
ZC3H6P61129 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC33.55■■■□□ 2.96
ZC3H6P61129 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC33.55■■■□□ 2.96
ZC3H6P61129 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC33.55■■■□□ 2.96
ZC3H6P61129 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC33.55■■■□□ 2.96
ZC3H6P61129 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC33.54■■■□□ 2.96
ZC3H6P61129 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC33.54■■■□□ 2.96
ZC3H6P61129 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC33.54■■■□□ 2.96
ZC3H6P61129 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC33.54■■■□□ 2.96
ZC3H6P61129 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC33.53■■■□□ 2.96
ZC3H6P61129 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC33.53■■■□□ 2.96
ZC3H6P61129 AC103724.3-201ENST00000564481 992 ntBASIC33.53■■■□□ 2.96
ZC3H6P61129 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC33.52■■■□□ 2.96
ZC3H6P61129 ABCB10P3-201ENST00000561950 2166 ntBASIC33.52■■■□□ 2.96
ZC3H6P61129 CERS2-201ENST00000271688 2544 ntAPPRIS P1 TSL 5 BASIC33.51■■■□□ 2.96
ZC3H6P61129 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC33.51■■■□□ 2.96
ZC3H6P61129 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC33.51■■■□□ 2.95
ZC3H6P61129 IDNK-201ENST00000376417 511 ntTSL 5 BASIC33.51■■■□□ 2.95
ZC3H6P61129 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC33.51■■■□□ 2.95
ZC3H6P61129 PRTG-204ENST00000561292 833 ntTSL 3 BASIC33.51■■■□□ 2.95
ZC3H6P61129 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC33.51■■■□□ 2.95
ZC3H6P61129 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC33.5■■■□□ 2.95
ZC3H6P61129 IDNK-203ENST00000405990 629 ntTSL 2 BASIC33.5■■■□□ 2.95
ZC3H6P61129 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC33.5■■■□□ 2.95
ZC3H6P61129 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC33.48■■■□□ 2.95
ZC3H6P61129 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC33.48■■■□□ 2.95
ZC3H6P61129 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC33.48■■■□□ 2.95
ZC3H6P61129 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC33.47■■■□□ 2.95
ZC3H6P61129 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC33.47■■■□□ 2.95
ZC3H6P61129 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC33.47■■■□□ 2.95
ZC3H6P61129 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC33.47■■■□□ 2.95
ZC3H6P61129 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC33.47■■■□□ 2.95
ZC3H6P61129 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC33.45■■■□□ 2.95
ZC3H6P61129 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC33.45■■■□□ 2.95
ZC3H6P61129 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC33.45■■■□□ 2.95
Retrieved 100 of 98,524 protein–RNA pairs in 53.4 ms