Protein–RNA interactions for Protein: P56703

WNT3, Proto-oncogene Wnt-3, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
WNT3P56703 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC23.42■■□□□ 1.34
WNT3P56703 AC016575.1-201ENST00000607026 382 ntBASIC23.42■■□□□ 1.34
WNT3P56703 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
WNT3P56703 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
WNT3P56703 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
WNT3P56703 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC23.41■■□□□ 1.34
WNT3P56703 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
WNT3P56703 LINC01971-201ENST00000617888 1048 ntBASIC23.41■■□□□ 1.34
WNT3P56703 CHML-204ENST00000638121 920 ntTSL 2 BASIC23.41■■□□□ 1.34
WNT3P56703 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
WNT3P56703 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC23.4■■□□□ 1.34
WNT3P56703 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
WNT3P56703 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC23.4■■□□□ 1.34
WNT3P56703 GDI1-215ENST00000630693 786 ntTSL 4 BASIC23.4■■□□□ 1.34
WNT3P56703 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
WNT3P56703 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
WNT3P56703 MIR3648-2-201ENST00000581792 180 ntBASIC23.39■■□□□ 1.33
WNT3P56703 MIR3648-1-201ENST00000615959 180 ntBASIC23.39■■□□□ 1.33
WNT3P56703 CR559946.2-201ENST00000623684 991 ntBASIC23.39■■□□□ 1.33
WNT3P56703 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC23.39■■□□□ 1.33
WNT3P56703 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC23.39■■□□□ 1.33
WNT3P56703 AC092803.2-201ENST00000564287 1899 ntBASIC23.39■■□□□ 1.33
WNT3P56703 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
WNT3P56703 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC23.38■■□□□ 1.33
WNT3P56703 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
WNT3P56703 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC23.38■■□□□ 1.33
WNT3P56703 MACF1-219ENST00000484793 834 ntTSL 2 BASIC23.38■■□□□ 1.33
WNT3P56703 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC23.38■■□□□ 1.33
WNT3P56703 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC23.38■■□□□ 1.33
WNT3P56703 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
WNT3P56703 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC23.38■■□□□ 1.33
WNT3P56703 DUSP8P4-201ENST00000399538 1761 ntBASIC23.37■■□□□ 1.33
WNT3P56703 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC23.37■■□□□ 1.33
WNT3P56703 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
WNT3P56703 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
WNT3P56703 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC23.36■■□□□ 1.33
WNT3P56703 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC23.35■■□□□ 1.33
WNT3P56703 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
WNT3P56703 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC23.35■■□□□ 1.33
WNT3P56703 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
WNT3P56703 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC23.34■■□□□ 1.33
WNT3P56703 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC23.34■■□□□ 1.33
WNT3P56703 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC23.34■■□□□ 1.33
WNT3P56703 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC23.34■■□□□ 1.33
WNT3P56703 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC23.34■■□□□ 1.33
WNT3P56703 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
WNT3P56703 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC23.33■■□□□ 1.33
WNT3P56703 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
WNT3P56703 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC23.33■■□□□ 1.33
WNT3P56703 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
WNT3P56703 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
WNT3P56703 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
WNT3P56703 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC23.33■■□□□ 1.32
WNT3P56703 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC23.33■■□□□ 1.32
WNT3P56703 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
WNT3P56703 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
WNT3P56703 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
WNT3P56703 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC23.32■■□□□ 1.32
WNT3P56703 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
WNT3P56703 MIR639-201ENST00000384974 98 ntBASIC23.32■■□□□ 1.32
WNT3P56703 DUX4L13-201ENST00000554103 1267 ntBASIC23.32■■□□□ 1.32
WNT3P56703 DUX4L15-201ENST00000611059 1267 ntBASIC23.32■■□□□ 1.32
WNT3P56703 DUX4L23-201ENST00000615195 1269 ntBASIC23.32■■□□□ 1.32
WNT3P56703 DUX4L24-201ENST00000617576 1269 ntBASIC23.32■■□□□ 1.32
WNT3P56703 DUX4L22-201ENST00000618238 1269 ntBASIC23.32■■□□□ 1.32
WNT3P56703 DUX4L20-201ENST00000619712 1269 ntBASIC23.32■■□□□ 1.32
WNT3P56703 DUX4L21-201ENST00000622058 1269 ntBASIC23.32■■□□□ 1.32
WNT3P56703 DUX4L10-201ENST00000622460 1267 ntBASIC23.32■■□□□ 1.32
WNT3P56703 DUX4L25-201ENST00000624915 1269 ntBASIC23.32■■□□□ 1.32
WNT3P56703 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC23.31■■□□□ 1.32
WNT3P56703 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC23.31■■□□□ 1.32
WNT3P56703 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC23.31■■□□□ 1.32
WNT3P56703 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
WNT3P56703 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC23.31■■□□□ 1.32
WNT3P56703 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC23.3■■□□□ 1.32
WNT3P56703 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
WNT3P56703 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC23.3■■□□□ 1.32
WNT3P56703 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC23.3■■□□□ 1.32
WNT3P56703 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC23.3■■□□□ 1.32
WNT3P56703 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC23.3■■□□□ 1.32
WNT3P56703 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
WNT3P56703 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
WNT3P56703 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
WNT3P56703 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC23.29■■□□□ 1.32
WNT3P56703 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC23.29■■□□□ 1.32
WNT3P56703 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC23.29■■□□□ 1.32
WNT3P56703 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
WNT3P56703 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
WNT3P56703 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC23.29■■□□□ 1.32
WNT3P56703 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
WNT3P56703 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
WNT3P56703 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC23.28■■□□□ 1.32
WNT3P56703 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
WNT3P56703 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
WNT3P56703 MIR4449-201ENST00000578365 66 ntBASIC23.28■■□□□ 1.32
WNT3P56703 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
WNT3P56703 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
WNT3P56703 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC23.28■■□□□ 1.32
WNT3P56703 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC23.27■■□□□ 1.32
WNT3P56703 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC23.27■■□□□ 1.32
Retrieved 100 of 98,524 protein–RNA pairs in 58.3 ms