Protein–RNA interactions for Protein: P45973

CBX5, Chromobox protein homolog 5, humanhuman

Predictions only

Length 191 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX5P45973 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC21.04■□□□□ 0.96
CBX5P45973 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC21.03■□□□□ 0.96
CBX5P45973 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CBX5P45973 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
CBX5P45973 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
CBX5P45973 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC21.03■□□□□ 0.96
CBX5P45973 AC092803.2-201ENST00000564287 1899 ntBASIC21.03■□□□□ 0.96
CBX5P45973 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
CBX5P45973 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CBX5P45973 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
CBX5P45973 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CBX5P45973 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC21.03■□□□□ 0.96
CBX5P45973 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC21.02■□□□□ 0.96
CBX5P45973 WHAMMP2-203ENST00000563942 1603 ntBASIC21.02■□□□□ 0.96
CBX5P45973 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CBX5P45973 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
CBX5P45973 RARA-203ENST00000394086 2008 ntTSL 2 BASIC21.01■□□□□ 0.95
CBX5P45973 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
CBX5P45973 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC21.01■□□□□ 0.95
CBX5P45973 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CBX5P45973 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
CBX5P45973 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC21■□□□□ 0.95
CBX5P45973 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
CBX5P45973 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC21■□□□□ 0.95
CBX5P45973 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
CBX5P45973 MIR762-201ENST00000390236 83 ntBASIC21■□□□□ 0.95
CBX5P45973 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC21■□□□□ 0.95
CBX5P45973 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
CBX5P45973 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC21■□□□□ 0.95
CBX5P45973 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
CBX5P45973 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CBX5P45973 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CBX5P45973 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC20.99■□□□□ 0.95
CBX5P45973 EI24-212ENST00000615917 1407 ntTSL 2 BASIC20.99■□□□□ 0.95
CBX5P45973 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
CBX5P45973 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CBX5P45973 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CBX5P45973 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
CBX5P45973 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC20.98■□□□□ 0.95
CBX5P45973 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CBX5P45973 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CBX5P45973 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC20.98■□□□□ 0.95
CBX5P45973 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC20.98■□□□□ 0.95
CBX5P45973 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CBX5P45973 CHML-205ENST00000638160 705 ntTSL 3 BASIC20.98■□□□□ 0.95
CBX5P45973 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CBX5P45973 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CBX5P45973 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
CBX5P45973 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC20.97■□□□□ 0.95
CBX5P45973 AP004609.3-201ENST00000610705 1884 ntBASIC20.97■□□□□ 0.95
CBX5P45973 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CBX5P45973 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
CBX5P45973 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
CBX5P45973 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
CBX5P45973 LINC00273-201ENST00000539813 1452 ntBASIC20.96■□□□□ 0.95
CBX5P45973 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CBX5P45973 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC20.96■□□□□ 0.95
CBX5P45973 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CBX5P45973 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CBX5P45973 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
CBX5P45973 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CBX5P45973 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CBX5P45973 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC20.95■□□□□ 0.94
CBX5P45973 AC108673.1-201ENST00000510422 1159 ntBASIC20.95■□□□□ 0.94
CBX5P45973 AC136428.2-201ENST00000563187 214 ntBASIC20.95■□□□□ 0.94
CBX5P45973 AC097358.2-201ENST00000607541 1159 ntBASIC20.95■□□□□ 0.94
CBX5P45973 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CBX5P45973 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC20.95■□□□□ 0.94
CBX5P45973 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
CBX5P45973 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CBX5P45973 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CBX5P45973 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CBX5P45973 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CBX5P45973 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC20.93■□□□□ 0.94
CBX5P45973 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC20.93■□□□□ 0.94
CBX5P45973 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CBX5P45973 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CBX5P45973 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CBX5P45973 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
CBX5P45973 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CBX5P45973 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC20.92■□□□□ 0.94
CBX5P45973 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CBX5P45973 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CBX5P45973 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CBX5P45973 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CBX5P45973 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC20.91■□□□□ 0.94
CBX5P45973 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC20.91■□□□□ 0.94
CBX5P45973 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC20.91■□□□□ 0.94
CBX5P45973 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC20.91■□□□□ 0.94
CBX5P45973 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
CBX5P45973 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC20.91■□□□□ 0.94
CBX5P45973 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CBX5P45973 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
CBX5P45973 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
CBX5P45973 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
CBX5P45973 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC20.9■□□□□ 0.94
CBX5P45973 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CBX5P45973 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
CBX5P45973 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CBX5P45973 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC20.9■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 64.4 ms