Protein–RNA interactions for Protein: P38606

ATP6V1A, V-type proton ATPase catalytic subunit A, humanhuman

Predictions only

Length 617 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V1AP38606 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC32.12■■■□□ 2.73
ATP6V1AP38606 AL592295.1-201ENST00000400984 884 ntBASIC32.11■■■□□ 2.73
ATP6V1AP38606 AC103834.1-201ENST00000520383 144 ntBASIC32.11■■■□□ 2.73
ATP6V1AP38606 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC32.11■■■□□ 2.73
ATP6V1AP38606 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC32.11■■■□□ 2.73
ATP6V1AP38606 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC32.1■■■□□ 2.73
ATP6V1AP38606 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC32.1■■■□□ 2.73
ATP6V1AP38606 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC32.1■■■□□ 2.73
ATP6V1AP38606 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC32.1■■■□□ 2.73
ATP6V1AP38606 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC32.1■■■□□ 2.73
ATP6V1AP38606 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC32.1■■■□□ 2.73
ATP6V1AP38606 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC32.1■■■□□ 2.73
ATP6V1AP38606 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC32.1■■■□□ 2.73
ATP6V1AP38606 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC32.09■■■□□ 2.73
ATP6V1AP38606 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC32.09■■■□□ 2.73
ATP6V1AP38606 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC32.09■■■□□ 2.73
ATP6V1AP38606 PVT1_1.1-201ENST00000615125 194 ntBASIC32.09■■■□□ 2.73
ATP6V1AP38606 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC32.09■■■□□ 2.73
ATP6V1AP38606 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC32.08■■■□□ 2.73
ATP6V1AP38606 YBX1P4-201ENST00000392794 808 ntBASIC32.07■■■□□ 2.72
ATP6V1AP38606 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC32.07■■■□□ 2.72
ATP6V1AP38606 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC32.07■■■□□ 2.72
ATP6V1AP38606 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC32.07■■■□□ 2.72
ATP6V1AP38606 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC32.07■■■□□ 2.72
ATP6V1AP38606 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC32.07■■■□□ 2.72
ATP6V1AP38606 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC32.06■■■□□ 2.72
ATP6V1AP38606 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC32.05■■■□□ 2.72
ATP6V1AP38606 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC32.05■■■□□ 2.72
ATP6V1AP38606 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC32.05■■■□□ 2.72
ATP6V1AP38606 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC32.04■■■□□ 2.72
ATP6V1AP38606 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC32.04■■■□□ 2.72
ATP6V1AP38606 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC32.04■■■□□ 2.72
ATP6V1AP38606 AC018755.3-202ENST00000596210 929 ntBASIC32.04■■■□□ 2.72
ATP6V1AP38606 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC32.04■■■□□ 2.72
ATP6V1AP38606 HYI-210ENST00000486909 905 ntTSL 5 BASIC32.03■■■□□ 2.72
ATP6V1AP38606 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC32.03■■■□□ 2.72
ATP6V1AP38606 NRG3-203ENST00000404547 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC32.02■■■□□ 2.72
ATP6V1AP38606 CERS2-201ENST00000271688 2544 ntAPPRIS P1 TSL 5 BASIC32.02■■■□□ 2.72
ATP6V1AP38606 GPI-201ENST00000356487 2210 ntAPPRIS P1 TSL 1 (best) BASIC32.02■■■□□ 2.72
ATP6V1AP38606 ABCB10P3-201ENST00000561950 2166 ntBASIC32.02■■■□□ 2.72
ATP6V1AP38606 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC32.02■■■□□ 2.72
ATP6V1AP38606 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC32.02■■■□□ 2.72
ATP6V1AP38606 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC32.01■■■□□ 2.72
ATP6V1AP38606 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC32.01■■■□□ 2.71
ATP6V1AP38606 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC32.01■■■□□ 2.71
ATP6V1AP38606 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC32.01■■■□□ 2.71
ATP6V1AP38606 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC32■■■□□ 2.71
ATP6V1AP38606 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC32■■■□□ 2.71
ATP6V1AP38606 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC31.99■■■□□ 2.71
ATP6V1AP38606 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC31.99■■■□□ 2.71
ATP6V1AP38606 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC31.99■■■□□ 2.71
ATP6V1AP38606 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC31.99■■■□□ 2.71
ATP6V1AP38606 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC31.99■■■□□ 2.71
ATP6V1AP38606 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC31.98■■■□□ 2.71
ATP6V1AP38606 HES6-204ENST00000409182 863 ntTSL 2 BASIC31.98■■■□□ 2.71
ATP6V1AP38606 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC31.98■■■□□ 2.71
ATP6V1AP38606 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC31.98■■■□□ 2.71
ATP6V1AP38606 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC31.98■■■□□ 2.71
ATP6V1AP38606 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC31.98■■■□□ 2.71
ATP6V1AP38606 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC31.98■■■□□ 2.71
ATP6V1AP38606 MTURN-203ENST00000409688 843 ntTSL 2 BASIC31.97■■■□□ 2.71
ATP6V1AP38606 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC31.97■■■□□ 2.71
ATP6V1AP38606 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC31.97■■■□□ 2.71
ATP6V1AP38606 AL139393.2-201ENST00000608721 2025 ntBASIC31.97■■■□□ 2.71
ATP6V1AP38606 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC31.96■■■□□ 2.71
ATP6V1AP38606 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC31.96■■■□□ 2.71
ATP6V1AP38606 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC31.95■■■□□ 2.71
ATP6V1AP38606 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC31.95■■■□□ 2.71
ATP6V1AP38606 AP002414.2-202ENST00000590929 1450 ntBASIC31.95■■■□□ 2.7
ATP6V1AP38606 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC31.94■■■□□ 2.7
ATP6V1AP38606 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC31.94■■■□□ 2.7
ATP6V1AP38606 TFEB-204ENST00000373033 2331 ntAPPRIS P1 TSL 1 (best) BASIC31.94■■■□□ 2.7
ATP6V1AP38606 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC31.94■■■□□ 2.7
ATP6V1AP38606 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC31.94■■■□□ 2.7
ATP6V1AP38606 MIR4508-201ENST00000584178 70 ntBASIC31.94■■■□□ 2.7
ATP6V1AP38606 AC131212.1-201ENST00000613771 668 ntBASIC31.94■■■□□ 2.7
ATP6V1AP38606 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC31.93■■■□□ 2.7
ATP6V1AP38606 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC31.92■■■□□ 2.7
ATP6V1AP38606 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC31.92■■■□□ 2.7
ATP6V1AP38606 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC31.92■■■□□ 2.7
ATP6V1AP38606 GUSBP5-201ENST00000418136 578 ntBASIC31.92■■■□□ 2.7
ATP6V1AP38606 OR2A1-AS1-204ENST00000470435 602 ntBASIC31.92■■■□□ 2.7
ATP6V1AP38606 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC31.92■■■□□ 2.7
ATP6V1AP38606 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC31.91■■■□□ 2.7
ATP6V1AP38606 IDNK-203ENST00000405990 629 ntTSL 2 BASIC31.91■■■□□ 2.7
ATP6V1AP38606 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC31.91■■■□□ 2.7
ATP6V1AP38606 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC31.91■■■□□ 2.7
ATP6V1AP38606 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC31.91■■■□□ 2.7
ATP6V1AP38606 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC31.9■■■□□ 2.7
ATP6V1AP38606 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC31.9■■■□□ 2.7
ATP6V1AP38606 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC31.9■■■□□ 2.7
ATP6V1AP38606 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC31.89■■■□□ 2.7
ATP6V1AP38606 IDNK-201ENST00000376417 511 ntTSL 5 BASIC31.89■■■□□ 2.7
ATP6V1AP38606 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC31.89■■■□□ 2.7
ATP6V1AP38606 THA1P-201ENST00000590384 1145 ntBASIC31.89■■■□□ 2.7
ATP6V1AP38606 AL359504.2-201ENST00000605506 1601 ntBASIC31.89■■■□□ 2.7
ATP6V1AP38606 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC31.88■■■□□ 2.69
ATP6V1AP38606 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC31.88■■■□□ 2.69
ATP6V1AP38606 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC31.88■■■□□ 2.69
ATP6V1AP38606 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC31.87■■■□□ 2.69
Retrieved 100 of 98,524 protein–RNA pairs in 765.7 ms