Protein–RNA interactions for Protein: P0DP91

CSB-PGBD3, Chimeric ERCC6-PGBD3 protein, humanhuman

Predictions only

Length 1,061 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSB-PGBD3P0DP91 YBX1P4-201ENST00000392794 808 ntBASIC33.3■■■□□ 2.92
CSB-PGBD3P0DP91 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC33.3■■■□□ 2.92
CSB-PGBD3P0DP91 AC009299.2-201ENST00000482477 511 ntBASIC33.3■■■□□ 2.92
CSB-PGBD3P0DP91 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC33.3■■■□□ 2.92
CSB-PGBD3P0DP91 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC33.3■■■□□ 2.92
CSB-PGBD3P0DP91 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC33.29■■■□□ 2.92
CSB-PGBD3P0DP91 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC33.29■■■□□ 2.92
CSB-PGBD3P0DP91 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC33.29■■■□□ 2.92
CSB-PGBD3P0DP91 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC33.29■■■□□ 2.92
CSB-PGBD3P0DP91 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC33.29■■■□□ 2.92
CSB-PGBD3P0DP91 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC33.29■■■□□ 2.92
CSB-PGBD3P0DP91 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC33.28■■■□□ 2.92
CSB-PGBD3P0DP91 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC33.28■■■□□ 2.92
CSB-PGBD3P0DP91 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC33.27■■■□□ 2.92
CSB-PGBD3P0DP91 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC33.26■■■□□ 2.92
CSB-PGBD3P0DP91 HYI-210ENST00000486909 905 ntTSL 5 BASIC33.26■■■□□ 2.91
CSB-PGBD3P0DP91 AC103834.1-201ENST00000520383 144 ntBASIC33.26■■■□□ 2.91
CSB-PGBD3P0DP91 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC33.26■■■□□ 2.91
CSB-PGBD3P0DP91 AC018755.3-202ENST00000596210 929 ntBASIC33.26■■■□□ 2.91
CSB-PGBD3P0DP91 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC33.26■■■□□ 2.91
CSB-PGBD3P0DP91 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC33.26■■■□□ 2.91
CSB-PGBD3P0DP91 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC33.26■■■□□ 2.91
CSB-PGBD3P0DP91 CERS2-201ENST00000271688 2544 ntAPPRIS P1 TSL 5 BASIC33.25■■■□□ 2.91
CSB-PGBD3P0DP91 AL592295.1-201ENST00000400984 884 ntBASIC33.25■■■□□ 2.91
CSB-PGBD3P0DP91 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC33.25■■■□□ 2.91
CSB-PGBD3P0DP91 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC33.25■■■□□ 2.91
CSB-PGBD3P0DP91 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC33.24■■■□□ 2.91
CSB-PGBD3P0DP91 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC33.24■■■□□ 2.91
CSB-PGBD3P0DP91 PVT1_1.1-201ENST00000615125 194 ntBASIC33.24■■■□□ 2.91
CSB-PGBD3P0DP91 NRG3-203ENST00000404547 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC33.24■■■□□ 2.91
CSB-PGBD3P0DP91 GPI-201ENST00000356487 2210 ntAPPRIS P1 TSL 1 (best) BASIC33.24■■■□□ 2.91
CSB-PGBD3P0DP91 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC33.23■■■□□ 2.91
CSB-PGBD3P0DP91 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC33.23■■■□□ 2.91
CSB-PGBD3P0DP91 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC33.23■■■□□ 2.91
CSB-PGBD3P0DP91 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC33.23■■■□□ 2.91
CSB-PGBD3P0DP91 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC33.23■■■□□ 2.91
CSB-PGBD3P0DP91 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC33.23■■■□□ 2.91
CSB-PGBD3P0DP91 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC33.22■■■□□ 2.91
CSB-PGBD3P0DP91 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC33.21■■■□□ 2.91
CSB-PGBD3P0DP91 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC33.21■■■□□ 2.91
CSB-PGBD3P0DP91 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC33.21■■■□□ 2.91
CSB-PGBD3P0DP91 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC33.21■■■□□ 2.91
CSB-PGBD3P0DP91 ABCB10P3-201ENST00000561950 2166 ntBASIC33.21■■■□□ 2.91
CSB-PGBD3P0DP91 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC33.2■■■□□ 2.91
CSB-PGBD3P0DP91 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC33.2■■■□□ 2.91
CSB-PGBD3P0DP91 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC33.2■■■□□ 2.91
CSB-PGBD3P0DP91 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC33.2■■■□□ 2.91
CSB-PGBD3P0DP91 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC33.19■■■□□ 2.9
CSB-PGBD3P0DP91 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC33.19■■■□□ 2.9
CSB-PGBD3P0DP91 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC33.19■■■□□ 2.9
CSB-PGBD3P0DP91 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC33.18■■■□□ 2.9
CSB-PGBD3P0DP91 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC33.17■■■□□ 2.9
CSB-PGBD3P0DP91 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC33.17■■■□□ 2.9
CSB-PGBD3P0DP91 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC33.17■■■□□ 2.9
CSB-PGBD3P0DP91 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC33.17■■■□□ 2.9
CSB-PGBD3P0DP91 MTURN-203ENST00000409688 843 ntTSL 2 BASIC33.16■■■□□ 2.9
CSB-PGBD3P0DP91 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC33.16■■■□□ 2.9
CSB-PGBD3P0DP91 AC131212.1-201ENST00000613771 668 ntBASIC33.16■■■□□ 2.9
CSB-PGBD3P0DP91 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC33.16■■■□□ 2.9
CSB-PGBD3P0DP91 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC33.15■■■□□ 2.9
CSB-PGBD3P0DP91 HES6-204ENST00000409182 863 ntTSL 2 BASIC33.15■■■□□ 2.9
CSB-PGBD3P0DP91 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC33.15■■■□□ 2.9
CSB-PGBD3P0DP91 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC33.15■■■□□ 2.9
CSB-PGBD3P0DP91 TFEB-204ENST00000373033 2331 ntAPPRIS P1 TSL 1 (best) BASIC33.14■■■□□ 2.9
CSB-PGBD3P0DP91 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC33.14■■■□□ 2.9
CSB-PGBD3P0DP91 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC33.14■■■□□ 2.9
CSB-PGBD3P0DP91 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC33.14■■■□□ 2.9
CSB-PGBD3P0DP91 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC33.14■■■□□ 2.9
CSB-PGBD3P0DP91 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC33.14■■■□□ 2.9
CSB-PGBD3P0DP91 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC33.14■■■□□ 2.9
CSB-PGBD3P0DP91 AL139393.2-201ENST00000608721 2025 ntBASIC33.14■■■□□ 2.9
CSB-PGBD3P0DP91 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC33.14■■■□□ 2.9
CSB-PGBD3P0DP91 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC33.13■■■□□ 2.89
CSB-PGBD3P0DP91 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC33.13■■■□□ 2.89
CSB-PGBD3P0DP91 AP002414.2-202ENST00000590929 1450 ntBASIC33.12■■■□□ 2.89
CSB-PGBD3P0DP91 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC33.12■■■□□ 2.89
CSB-PGBD3P0DP91 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC33.12■■■□□ 2.89
CSB-PGBD3P0DP91 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC33.12■■■□□ 2.89
CSB-PGBD3P0DP91 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC33.11■■■□□ 2.89
CSB-PGBD3P0DP91 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC33.11■■■□□ 2.89
CSB-PGBD3P0DP91 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC33.1■■■□□ 2.89
CSB-PGBD3P0DP91 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC33.1■■■□□ 2.89
CSB-PGBD3P0DP91 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC33.1■■■□□ 2.89
CSB-PGBD3P0DP91 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC33.09■■■□□ 2.89
CSB-PGBD3P0DP91 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC33.09■■■□□ 2.89
CSB-PGBD3P0DP91 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC33.09■■■□□ 2.89
CSB-PGBD3P0DP91 MIR4508-201ENST00000584178 70 ntBASIC33.08■■■□□ 2.89
CSB-PGBD3P0DP91 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC33.07■■■□□ 2.88
CSB-PGBD3P0DP91 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC33.07■■■□□ 2.88
CSB-PGBD3P0DP91 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC33.07■■■□□ 2.88
CSB-PGBD3P0DP91 GUSBP5-201ENST00000418136 578 ntBASIC33.07■■■□□ 2.88
CSB-PGBD3P0DP91 OR2A1-AS1-204ENST00000470435 602 ntBASIC33.07■■■□□ 2.88
CSB-PGBD3P0DP91 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC33.07■■■□□ 2.88
CSB-PGBD3P0DP91 THA1P-201ENST00000590384 1145 ntBASIC33.07■■■□□ 2.88
CSB-PGBD3P0DP91 IDNK-203ENST00000405990 629 ntTSL 2 BASIC33.06■■■□□ 2.88
CSB-PGBD3P0DP91 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC33.06■■■□□ 2.88
CSB-PGBD3P0DP91 AL359504.2-201ENST00000605506 1601 ntBASIC33.06■■■□□ 2.88
CSB-PGBD3P0DP91 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC33.05■■■□□ 2.88
CSB-PGBD3P0DP91 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC33.05■■■□□ 2.88
CSB-PGBD3P0DP91 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC33.05■■■□□ 2.88
Retrieved 100 of 98,524 protein–RNA pairs in 12 ms