Protein–RNA interactions for Protein: P07996

THBS1, Thrombospondin-1, humanhuman

Predictions only

Length 1,170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THBS1P07996 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC22.78■■□□□ 1.24
THBS1P07996 AC148477.6-201ENST00000623746 465 ntBASIC22.78■■□□□ 1.24
THBS1P07996 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC22.78■■□□□ 1.24
THBS1P07996 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
THBS1P07996 AC091060.1-201ENST00000623524 1766 ntBASIC22.78■■□□□ 1.24
THBS1P07996 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
THBS1P07996 AGPS-202ENST00000409888 815 ntTSL 4 BASIC22.77■■□□□ 1.24
THBS1P07996 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC22.77■■□□□ 1.24
THBS1P07996 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC22.77■■□□□ 1.24
THBS1P07996 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
THBS1P07996 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC22.77■■□□□ 1.24
THBS1P07996 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
THBS1P07996 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC22.77■■□□□ 1.24
THBS1P07996 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC22.77■■□□□ 1.23
THBS1P07996 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC22.76■■□□□ 1.23
THBS1P07996 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
THBS1P07996 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
THBS1P07996 HES6-205ENST00000409356 528 ntTSL 2 BASIC22.76■■□□□ 1.23
THBS1P07996 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC22.76■■□□□ 1.23
THBS1P07996 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC22.76■■□□□ 1.23
THBS1P07996 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC22.76■■□□□ 1.23
THBS1P07996 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC22.76■■□□□ 1.23
THBS1P07996 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC22.76■■□□□ 1.23
THBS1P07996 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC22.75■■□□□ 1.23
THBS1P07996 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC22.75■■□□□ 1.23
THBS1P07996 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
THBS1P07996 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
THBS1P07996 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC22.75■■□□□ 1.23
THBS1P07996 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC22.75■■□□□ 1.23
THBS1P07996 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
THBS1P07996 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
THBS1P07996 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
THBS1P07996 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
THBS1P07996 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC22.74■■□□□ 1.23
THBS1P07996 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC22.73■■□□□ 1.23
THBS1P07996 MIR219A2-201ENST00000608502 1504 ntBASIC22.73■■□□□ 1.23
THBS1P07996 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
THBS1P07996 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC22.73■■□□□ 1.23
THBS1P07996 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC22.73■■□□□ 1.23
THBS1P07996 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC22.73■■□□□ 1.23
THBS1P07996 RNF166-209ENST00000567844 633 ntTSL 5 BASIC22.73■■□□□ 1.23
THBS1P07996 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC22.73■■□□□ 1.23
THBS1P07996 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
THBS1P07996 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
THBS1P07996 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
THBS1P07996 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC22.72■■□□□ 1.23
THBS1P07996 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC22.72■■□□□ 1.23
THBS1P07996 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC22.72■■□□□ 1.23
THBS1P07996 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
THBS1P07996 AC145676.1-201ENST00000514988 2004 ntBASIC22.72■■□□□ 1.23
THBS1P07996 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC22.72■■□□□ 1.23
THBS1P07996 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC22.72■■□□□ 1.23
THBS1P07996 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC22.71■■□□□ 1.23
THBS1P07996 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
THBS1P07996 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC22.71■■□□□ 1.23
THBS1P07996 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
THBS1P07996 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC22.71■■□□□ 1.23
THBS1P07996 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC22.71■■□□□ 1.23
THBS1P07996 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC22.7■■□□□ 1.22
THBS1P07996 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC22.7■■□□□ 1.22
THBS1P07996 CHST11-203ENST00000547956 936 ntTSL 2 BASIC22.7■■□□□ 1.22
THBS1P07996 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC22.7■■□□□ 1.22
THBS1P07996 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC22.7■■□□□ 1.22
THBS1P07996 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
THBS1P07996 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
THBS1P07996 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
THBS1P07996 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC22.69■■□□□ 1.22
THBS1P07996 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
THBS1P07996 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC22.69■■□□□ 1.22
THBS1P07996 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC22.69■■□□□ 1.22
THBS1P07996 MACF1-219ENST00000484793 834 ntTSL 2 BASIC22.68■■□□□ 1.22
THBS1P07996 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
THBS1P07996 CR559946.2-201ENST00000623684 991 ntBASIC22.68■■□□□ 1.22
THBS1P07996 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC22.68■■□□□ 1.22
THBS1P07996 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
THBS1P07996 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
THBS1P07996 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
THBS1P07996 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC22.67■■□□□ 1.22
THBS1P07996 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
THBS1P07996 AC092803.2-201ENST00000564287 1899 ntBASIC22.67■■□□□ 1.22
THBS1P07996 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC22.67■■□□□ 1.22
THBS1P07996 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
THBS1P07996 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
THBS1P07996 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
THBS1P07996 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
THBS1P07996 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC22.65■■□□□ 1.22
THBS1P07996 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
THBS1P07996 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC22.65■■□□□ 1.22
THBS1P07996 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC22.64■■□□□ 1.22
THBS1P07996 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC22.64■■□□□ 1.22
THBS1P07996 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC22.64■■□□□ 1.22
THBS1P07996 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC22.64■■□□□ 1.22
THBS1P07996 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC22.64■■□□□ 1.22
THBS1P07996 DUSP8P4-201ENST00000399538 1761 ntBASIC22.64■■□□□ 1.22
THBS1P07996 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
THBS1P07996 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC22.64■■□□□ 1.21
THBS1P07996 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
THBS1P07996 RPS2-202ENST00000526522 924 ntTSL 2 BASIC22.64■■□□□ 1.21
THBS1P07996 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC22.64■■□□□ 1.21
THBS1P07996 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Retrieved 100 of 98,524 protein–RNA pairs in 56.3 ms