Protein–RNA interactions for Protein: P00558

PGK1, Phosphoglycerate kinase 1, humanhuman

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PGK1P00558 AC139795.1-202ENST00000500444 432 ntBASIC27.95■■■□□ 2.06
PGK1P00558 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC27.95■■■□□ 2.06
PGK1P00558 MIR6765-201ENST00000614092 87 ntBASIC27.95■■■□□ 2.06
PGK1P00558 AC074183.2-201ENST00000623112 922 ntBASIC27.95■■■□□ 2.06
PGK1P00558 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC27.95■■■□□ 2.06
PGK1P00558 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC27.94■■■□□ 2.06
PGK1P00558 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC27.94■■■□□ 2.06
PGK1P00558 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC27.94■■■□□ 2.06
PGK1P00558 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC27.94■■■□□ 2.06
PGK1P00558 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC27.94■■■□□ 2.06
PGK1P00558 PFN2-211ENST00000489155 636 ntTSL 4 BASIC27.94■■■□□ 2.06
PGK1P00558 MIR3960-201ENST00000583311 91 ntBASIC27.94■■■□□ 2.06
PGK1P00558 SLC15A4-201ENST00000266771 2779 ntAPPRIS P1 TSL 1 (best) BASIC27.94■■■□□ 2.06
PGK1P00558 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC27.93■■■□□ 2.06
PGK1P00558 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC27.93■■■□□ 2.06
PGK1P00558 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC27.93■■■□□ 2.06
PGK1P00558 AC009299.2-201ENST00000482477 511 ntBASIC27.93■■■□□ 2.06
PGK1P00558 AC103834.1-201ENST00000520383 144 ntBASIC27.93■■■□□ 2.06
PGK1P00558 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC27.93■■■□□ 2.06
PGK1P00558 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC27.93■■■□□ 2.06
PGK1P00558 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC27.93■■■□□ 2.06
PGK1P00558 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC27.93■■■□□ 2.06
PGK1P00558 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC27.92■■■□□ 2.06
PGK1P00558 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC27.92■■■□□ 2.06
PGK1P00558 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC27.92■■■□□ 2.06
PGK1P00558 PVT1_1.1-201ENST00000615125 194 ntBASIC27.92■■■□□ 2.06
PGK1P00558 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC27.92■■■□□ 2.06
PGK1P00558 ST7-205ENST00000393446 2114 ntTSL 5 BASIC27.92■■■□□ 2.06
PGK1P00558 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC27.92■■■□□ 2.06
PGK1P00558 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC27.92■■■□□ 2.06
PGK1P00558 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC27.91■■■□□ 2.06
PGK1P00558 AL592295.1-201ENST00000400984 884 ntBASIC27.91■■■□□ 2.06
PGK1P00558 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC27.91■■■□□ 2.06
PGK1P00558 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC27.91■■■□□ 2.06
PGK1P00558 ABCB10P3-201ENST00000561950 2166 ntBASIC27.91■■■□□ 2.06
PGK1P00558 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC27.9■■■□□ 2.06
PGK1P00558 SEPT3-203ENST00000396426 2586 ntAPPRIS P4 TSL 1 (best) BASIC27.9■■■□□ 2.06
PGK1P00558 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC27.9■■■□□ 2.06
PGK1P00558 YBX1P4-201ENST00000392794 808 ntBASIC27.89■■■□□ 2.06
PGK1P00558 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC27.89■■■□□ 2.06
PGK1P00558 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC27.89■■■□□ 2.05
PGK1P00558 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC27.89■■■□□ 2.05
PGK1P00558 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC27.89■■■□□ 2.05
PGK1P00558 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC27.88■■■□□ 2.05
PGK1P00558 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC27.88■■■□□ 2.05
PGK1P00558 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC27.88■■■□□ 2.05
PGK1P00558 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC27.88■■■□□ 2.05
PGK1P00558 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC27.87■■■□□ 2.05
PGK1P00558 AC018755.3-202ENST00000596210 929 ntBASIC27.87■■■□□ 2.05
PGK1P00558 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC27.87■■■□□ 2.05
PGK1P00558 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC27.87■■■□□ 2.05
PGK1P00558 AL139393.2-201ENST00000608721 2025 ntBASIC27.86■■■□□ 2.05
PGK1P00558 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC27.86■■■□□ 2.05
PGK1P00558 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC27.86■■■□□ 2.05
PGK1P00558 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC27.86■■■□□ 2.05
PGK1P00558 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC27.86■■■□□ 2.05
PGK1P00558 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC27.85■■■□□ 2.05
PGK1P00558 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC27.85■■■□□ 2.05
PGK1P00558 CBX4-201ENST00000269397 2664 ntAPPRIS P2 TSL 1 (best) BASIC27.85■■■□□ 2.05
PGK1P00558 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC27.84■■■□□ 2.05
PGK1P00558 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC27.84■■■□□ 2.05
PGK1P00558 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC27.84■■■□□ 2.05
PGK1P00558 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC27.84■■■□□ 2.05
PGK1P00558 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC27.84■■■□□ 2.05
PGK1P00558 HYI-210ENST00000486909 905 ntTSL 5 BASIC27.84■■■□□ 2.05
PGK1P00558 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC27.84■■■□□ 2.05
PGK1P00558 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC27.83■■■□□ 2.05
PGK1P00558 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC27.83■■■□□ 2.05
PGK1P00558 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC27.82■■■□□ 2.04
PGK1P00558 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC27.82■■■□□ 2.04
PGK1P00558 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC27.82■■■□□ 2.04
PGK1P00558 MTURN-203ENST00000409688 843 ntTSL 2 BASIC27.82■■■□□ 2.04
PGK1P00558 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC27.82■■■□□ 2.04
PGK1P00558 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC27.82■■■□□ 2.04
PGK1P00558 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC27.82■■■□□ 2.04
PGK1P00558 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC27.82■■■□□ 2.04
PGK1P00558 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC27.82■■■□□ 2.04
PGK1P00558 ST7-202ENST00000323984 2142 ntTSL 5 BASIC27.81■■■□□ 2.04
PGK1P00558 ST7-207ENST00000393449 2127 ntTSL 5 BASIC27.81■■■□□ 2.04
PGK1P00558 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC27.81■■■□□ 2.04
PGK1P00558 HES6-204ENST00000409182 863 ntTSL 2 BASIC27.8■■■□□ 2.04
PGK1P00558 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC27.8■■■□□ 2.04
PGK1P00558 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC27.8■■■□□ 2.04
PGK1P00558 AP002414.2-202ENST00000590929 1450 ntBASIC27.8■■■□□ 2.04
PGK1P00558 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC27.8■■■□□ 2.04
PGK1P00558 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC27.8■■■□□ 2.04
PGK1P00558 AC131212.1-201ENST00000613771 668 ntBASIC27.79■■■□□ 2.04
PGK1P00558 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC27.79■■■□□ 2.04
PGK1P00558 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC27.78■■■□□ 2.04
PGK1P00558 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC27.78■■■□□ 2.04
PGK1P00558 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC27.78■■■□□ 2.04
PGK1P00558 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC27.77■■■□□ 2.04
PGK1P00558 TXNRD2-204ENST00000400521 2115 ntAPPRIS P2 TSL 1 (best) BASIC27.77■■■□□ 2.04
PGK1P00558 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC27.77■■■□□ 2.04
PGK1P00558 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC27.76■■■□□ 2.04
PGK1P00558 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC27.76■■■□□ 2.03
PGK1P00558 LFNG-201ENST00000222725 2377 ntAPPRIS P4 TSL 5 BASIC27.75■■■□□ 2.03
PGK1P00558 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC27.75■■■□□ 2.03
PGK1P00558 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC27.75■■■□□ 2.03
PGK1P00558 AL359504.2-201ENST00000605506 1601 ntBASIC27.75■■■□□ 2.03
Retrieved 100 of 98,524 protein–RNA pairs in 287.9 ms