Protein–RNA interactions for Protein: O96005

CLPTM1, Cleft lip and palate transmembrane protein 1, humanhuman

Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1O96005 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
CLPTM1O96005 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
CLPTM1O96005 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
CLPTM1O96005 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC23.1■■□□□ 1.29
CLPTM1O96005 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC23.1■■□□□ 1.29
CLPTM1O96005 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
CLPTM1O96005 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC23.1■■□□□ 1.29
CLPTM1O96005 AC012676.1-201ENST00000574705 1949 ntBASIC23.1■■□□□ 1.29
CLPTM1O96005 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC23.09■■□□□ 1.29
CLPTM1O96005 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC23.09■■□□□ 1.29
CLPTM1O96005 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
CLPTM1O96005 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC23.09■■□□□ 1.29
CLPTM1O96005 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
CLPTM1O96005 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
CLPTM1O96005 ERN1-208ENST00000606895 2068 ntBASIC23.09■■□□□ 1.29
CLPTM1O96005 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC23.08■■□□□ 1.29
CLPTM1O96005 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
CLPTM1O96005 DENR-202ENST00000455982 1052 ntTSL 5 BASIC23.08■■□□□ 1.29
CLPTM1O96005 HNRNPLP2-201ENST00000568980 1570 ntBASIC23.08■■□□□ 1.29
CLPTM1O96005 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
CLPTM1O96005 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC23.08■■□□□ 1.28
CLPTM1O96005 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC23.08■■□□□ 1.28
CLPTM1O96005 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
CLPTM1O96005 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
CLPTM1O96005 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
CLPTM1O96005 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC23.07■■□□□ 1.28
CLPTM1O96005 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC23.07■■□□□ 1.28
CLPTM1O96005 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC23.06■■□□□ 1.28
CLPTM1O96005 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
CLPTM1O96005 MIR762-201ENST00000390236 83 ntBASIC23.06■■□□□ 1.28
CLPTM1O96005 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC23.06■■□□□ 1.28
CLPTM1O96005 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC23.06■■□□□ 1.28
CLPTM1O96005 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
CLPTM1O96005 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
CLPTM1O96005 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC23.05■■□□□ 1.28
CLPTM1O96005 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
CLPTM1O96005 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC23.05■■□□□ 1.28
CLPTM1O96005 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
CLPTM1O96005 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
CLPTM1O96005 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC23.03■■□□□ 1.28
CLPTM1O96005 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC23.03■■□□□ 1.28
CLPTM1O96005 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC23.03■■□□□ 1.28
CLPTM1O96005 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
CLPTM1O96005 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
CLPTM1O96005 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
CLPTM1O96005 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC23.03■■□□□ 1.28
CLPTM1O96005 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
CLPTM1O96005 TMEM202-AS1-202ENST00000565181 2325 ntBASIC23.02■■□□□ 1.28
CLPTM1O96005 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
CLPTM1O96005 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC23.02■■□□□ 1.28
CLPTM1O96005 CHML-205ENST00000638160 705 ntTSL 3 BASIC23.02■■□□□ 1.28
CLPTM1O96005 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC23.02■■□□□ 1.28
CLPTM1O96005 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
CLPTM1O96005 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC23.02■■□□□ 1.27
CLPTM1O96005 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC23.01■■□□□ 1.27
CLPTM1O96005 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
CLPTM1O96005 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
CLPTM1O96005 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC23.01■■□□□ 1.27
CLPTM1O96005 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC23■■□□□ 1.27
CLPTM1O96005 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
CLPTM1O96005 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC23■■□□□ 1.27
CLPTM1O96005 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC23■■□□□ 1.27
CLPTM1O96005 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC23■■□□□ 1.27
CLPTM1O96005 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC23■■□□□ 1.27
CLPTM1O96005 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC22.99■■□□□ 1.27
CLPTM1O96005 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC22.99■■□□□ 1.27
CLPTM1O96005 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
CLPTM1O96005 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
CLPTM1O96005 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
CLPTM1O96005 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
CLPTM1O96005 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC22.99■■□□□ 1.27
CLPTM1O96005 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
CLPTM1O96005 NRG1-221ENST00000614767 762 ntTSL 5 BASIC22.99■■□□□ 1.27
CLPTM1O96005 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
CLPTM1O96005 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
CLPTM1O96005 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
CLPTM1O96005 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
CLPTM1O96005 AL162393.1-201ENST00000437852 946 ntBASIC22.98■■□□□ 1.27
CLPTM1O96005 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
CLPTM1O96005 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
CLPTM1O96005 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC22.98■■□□□ 1.27
CLPTM1O96005 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC22.97■■□□□ 1.27
CLPTM1O96005 AP006261.1-201ENST00000584783 668 ntBASIC22.97■■□□□ 1.27
CLPTM1O96005 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
CLPTM1O96005 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
CLPTM1O96005 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
CLPTM1O96005 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC22.96■■□□□ 1.27
CLPTM1O96005 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC22.96■■□□□ 1.27
CLPTM1O96005 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
CLPTM1O96005 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC22.96■■□□□ 1.27
CLPTM1O96005 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
CLPTM1O96005 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
CLPTM1O96005 RPS2P35-201ENST00000443417 897 ntBASIC22.95■■□□□ 1.26
CLPTM1O96005 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC22.95■■□□□ 1.26
CLPTM1O96005 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC22.95■■□□□ 1.26
CLPTM1O96005 LINC00543-201ENST00000567234 1845 ntBASIC22.95■■□□□ 1.26
CLPTM1O96005 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
CLPTM1O96005 AC005559.1-201ENST00000589661 871 ntBASIC22.95■■□□□ 1.26
CLPTM1O96005 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
CLPTM1O96005 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC22.94■■□□□ 1.26
Retrieved 100 of 98,524 protein–RNA pairs in 97.8 ms