Protein–RNA interactions for Protein: O95832

CLDN1, Claudin-1, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN1O95832 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC22.14■■□□□ 1.13
CLDN1O95832 AC139795.1-202ENST00000500444 432 ntBASIC22.14■■□□□ 1.13
CLDN1O95832 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC22.14■■□□□ 1.13
CLDN1O95832 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC22.13■■□□□ 1.13
CLDN1O95832 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
CLDN1O95832 PVT1_1.1-201ENST00000615125 194 ntBASIC22.13■■□□□ 1.13
CLDN1O95832 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC22.13■■□□□ 1.13
CLDN1O95832 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC22.13■■□□□ 1.13
CLDN1O95832 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
CLDN1O95832 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC22.12■■□□□ 1.13
CLDN1O95832 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC22.11■■□□□ 1.13
CLDN1O95832 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
CLDN1O95832 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC22.11■■□□□ 1.13
CLDN1O95832 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
CLDN1O95832 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
CLDN1O95832 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
CLDN1O95832 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC22.09■■□□□ 1.13
CLDN1O95832 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
CLDN1O95832 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC22.08■■□□□ 1.13
CLDN1O95832 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
CLDN1O95832 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC22.08■■□□□ 1.13
CLDN1O95832 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
CLDN1O95832 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
CLDN1O95832 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC22.08■■□□□ 1.13
CLDN1O95832 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC22.08■■□□□ 1.13
CLDN1O95832 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC22.08■■□□□ 1.13
CLDN1O95832 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC22.07■■□□□ 1.12
CLDN1O95832 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC22.07■■□□□ 1.12
CLDN1O95832 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
CLDN1O95832 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC22.07■■□□□ 1.12
CLDN1O95832 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC22.06■■□□□ 1.12
CLDN1O95832 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC22.06■■□□□ 1.12
CLDN1O95832 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
CLDN1O95832 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC22.06■■□□□ 1.12
CLDN1O95832 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC22.06■■□□□ 1.12
CLDN1O95832 AC025884.2-201ENST00000553429 711 ntBASIC22.06■■□□□ 1.12
CLDN1O95832 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC22.06■■□□□ 1.12
CLDN1O95832 LSM7-203ENST00000585409 512 ntTSL 2 BASIC22.06■■□□□ 1.12
CLDN1O95832 RAP2CP1-202ENST00000605179 643 ntBASIC22.06■■□□□ 1.12
CLDN1O95832 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC22.06■■□□□ 1.12
CLDN1O95832 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
CLDN1O95832 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
CLDN1O95832 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC22.05■■□□□ 1.12
CLDN1O95832 PRTG-204ENST00000561292 833 ntTSL 3 BASIC22.05■■□□□ 1.12
CLDN1O95832 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
CLDN1O95832 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC22.05■■□□□ 1.12
CLDN1O95832 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC22.05■■□□□ 1.12
CLDN1O95832 MIR4508-201ENST00000584178 70 ntBASIC22.05■■□□□ 1.12
CLDN1O95832 MIR6765-201ENST00000614092 87 ntBASIC22.05■■□□□ 1.12
CLDN1O95832 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC22.05■■□□□ 1.12
CLDN1O95832 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC22.04■■□□□ 1.12
CLDN1O95832 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC22.04■■□□□ 1.12
CLDN1O95832 AC093536.1-201ENST00000569153 554 ntBASIC22.04■■□□□ 1.12
CLDN1O95832 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
CLDN1O95832 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC22.04■■□□□ 1.12
CLDN1O95832 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC22.04■■□□□ 1.12
CLDN1O95832 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC22.03■■□□□ 1.12
CLDN1O95832 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC22.03■■□□□ 1.12
CLDN1O95832 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
CLDN1O95832 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
CLDN1O95832 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC22.03■■□□□ 1.12
CLDN1O95832 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
CLDN1O95832 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
CLDN1O95832 MEST-211ENST00000437945 1455 ntTSL 5 BASIC22.03■■□□□ 1.12
CLDN1O95832 ABCB10P3-201ENST00000561950 2166 ntBASIC22.02■■□□□ 1.12
CLDN1O95832 AC008406.3-201ENST00000620001 1374 ntBASIC22.02■■□□□ 1.12
CLDN1O95832 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC22.02■■□□□ 1.12
CLDN1O95832 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC22.02■■□□□ 1.12
CLDN1O95832 HYI-210ENST00000486909 905 ntTSL 5 BASIC22.02■■□□□ 1.12
CLDN1O95832 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC22.02■■□□□ 1.11
CLDN1O95832 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC22.01■■□□□ 1.11
CLDN1O95832 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC22.01■■□□□ 1.11
CLDN1O95832 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
CLDN1O95832 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC22.01■■□□□ 1.11
CLDN1O95832 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC22.01■■□□□ 1.11
CLDN1O95832 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC22.01■■□□□ 1.11
CLDN1O95832 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC22.01■■□□□ 1.11
CLDN1O95832 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
CLDN1O95832 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
CLDN1O95832 AL359258.2-201ENST00000564063 1566 ntBASIC22■■□□□ 1.11
CLDN1O95832 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC22■■□□□ 1.11
CLDN1O95832 AC103724.3-201ENST00000564481 992 ntBASIC22■■□□□ 1.11
CLDN1O95832 AL031848.2-201ENST00000607670 837 ntBASIC22■■□□□ 1.11
CLDN1O95832 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC22■■□□□ 1.11
CLDN1O95832 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
CLDN1O95832 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
CLDN1O95832 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC21.99■■□□□ 1.11
CLDN1O95832 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC21.99■■□□□ 1.11
CLDN1O95832 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC21.99■■□□□ 1.11
CLDN1O95832 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC21.98■■□□□ 1.11
CLDN1O95832 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
CLDN1O95832 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC21.98■■□□□ 1.11
CLDN1O95832 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
CLDN1O95832 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC21.98■■□□□ 1.11
CLDN1O95832 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
CLDN1O95832 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC21.98■■□□□ 1.11
CLDN1O95832 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
CLDN1O95832 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
CLDN1O95832 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC21.97■■□□□ 1.11
CLDN1O95832 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Retrieved 100 of 98,524 protein–RNA pairs in 19.1 ms