Protein–RNA interactions for Protein: O95551

TDP2, Tyrosyl-DNA phosphodiesterase 2, humanhuman

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TDP2O95551 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC28.19■■■□□ 2.1
TDP2O95551 GPX1-201ENST00000419349 1106 ntBASIC28.19■■■□□ 2.1
TDP2O95551 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
TDP2O95551 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC28.19■■■□□ 2.1
TDP2O95551 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
TDP2O95551 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC28.19■■■□□ 2.1
TDP2O95551 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
TDP2O95551 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC28.18■■■□□ 2.1
TDP2O95551 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC28.17■■■□□ 2.1
TDP2O95551 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC28.17■■■□□ 2.1
TDP2O95551 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
TDP2O95551 AC126177.7-201ENST00000547904 679 ntBASIC28.16■■■□□ 2.1
TDP2O95551 HSD17B1P1-201ENST00000590052 955 ntBASIC28.16■■■□□ 2.1
TDP2O95551 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC28.16■■■□□ 2.1
TDP2O95551 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC28.15■■■□□ 2.1
TDP2O95551 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC28.14■■■□□ 2.1
TDP2O95551 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC28.14■■■□□ 2.1
TDP2O95551 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC28.14■■■□□ 2.1
TDP2O95551 AL157400.5-201ENST00000507624 621 ntBASIC28.14■■■□□ 2.1
TDP2O95551 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.1
TDP2O95551 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC28.14■■■□□ 2.1
TDP2O95551 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.09
TDP2O95551 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.09
TDP2O95551 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC28.14■■■□□ 2.09
TDP2O95551 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC28.14■■■□□ 2.09
TDP2O95551 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC28.13■■■□□ 2.09
TDP2O95551 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC28.13■■■□□ 2.09
TDP2O95551 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC28.12■■■□□ 2.09
TDP2O95551 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC28.12■■■□□ 2.09
TDP2O95551 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC28.12■■■□□ 2.09
TDP2O95551 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC28.12■■■□□ 2.09
TDP2O95551 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC28.11■■■□□ 2.09
TDP2O95551 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC28.11■■■□□ 2.09
TDP2O95551 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC28.11■■■□□ 2.09
TDP2O95551 MOB2-207ENST00000614710 705 ntTSL 5 BASIC28.11■■■□□ 2.09
TDP2O95551 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC28.11■■■□□ 2.09
TDP2O95551 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC28.11■■■□□ 2.09
TDP2O95551 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC28.1■■■□□ 2.09
TDP2O95551 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC28.1■■■□□ 2.09
TDP2O95551 AC092296.2-201ENST00000589470 999 ntBASIC28.1■■■□□ 2.09
TDP2O95551 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC28.1■■■□□ 2.09
TDP2O95551 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC28.09■■■□□ 2.09
TDP2O95551 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC28.09■■■□□ 2.09
TDP2O95551 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC28.09■■■□□ 2.09
TDP2O95551 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC28.09■■■□□ 2.09
TDP2O95551 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC28.09■■■□□ 2.09
TDP2O95551 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC28.08■■■□□ 2.09
TDP2O95551 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC28.08■■■□□ 2.09
TDP2O95551 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC28.08■■■□□ 2.09
TDP2O95551 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC28.08■■■□□ 2.09
TDP2O95551 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC28.07■■■□□ 2.08
TDP2O95551 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC28.07■■■□□ 2.08
TDP2O95551 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC28.06■■■□□ 2.08
TDP2O95551 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC28.06■■■□□ 2.08
TDP2O95551 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC28.05■■■□□ 2.08
TDP2O95551 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC28.05■■■□□ 2.08
TDP2O95551 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC28.05■■■□□ 2.08
TDP2O95551 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC28.05■■■□□ 2.08
TDP2O95551 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC28.04■■■□□ 2.08
TDP2O95551 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC28.04■■■□□ 2.08
TDP2O95551 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC28.04■■■□□ 2.08
TDP2O95551 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC28.04■■■□□ 2.08
TDP2O95551 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC28.04■■■□□ 2.08
TDP2O95551 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC28.03■■■□□ 2.08
TDP2O95551 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC28.03■■■□□ 2.08
TDP2O95551 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC28.03■■■□□ 2.08
TDP2O95551 AL121749.1-202ENST00000609313 2153 ntBASIC28.03■■■□□ 2.08
TDP2O95551 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC28.02■■■□□ 2.08
TDP2O95551 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC28.02■■■□□ 2.08
TDP2O95551 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC28.02■■■□□ 2.08
TDP2O95551 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC28.02■■■□□ 2.08
TDP2O95551 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC28.01■■■□□ 2.07
TDP2O95551 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC28.01■■■□□ 2.07
TDP2O95551 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC28.01■■■□□ 2.07
TDP2O95551 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC28■■■□□ 2.07
TDP2O95551 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC28■■■□□ 2.07
TDP2O95551 AL359504.2-201ENST00000605506 1601 ntBASIC28■■■□□ 2.07
TDP2O95551 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC28■■■□□ 2.07
TDP2O95551 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC28■■■□□ 2.07
TDP2O95551 BRD4-212ENST00000630599 726 ntTSL 2 BASIC28■■■□□ 2.07
TDP2O95551 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC28■■■□□ 2.07
TDP2O95551 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC28■■■□□ 2.07
TDP2O95551 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC27.99■■■□□ 2.07
TDP2O95551 RNF126P1-201ENST00000567452 1320 ntBASIC27.99■■■□□ 2.07
TDP2O95551 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC27.99■■■□□ 2.07
TDP2O95551 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC27.99■■■□□ 2.07
TDP2O95551 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC27.99■■■□□ 2.07
TDP2O95551 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC27.99■■■□□ 2.07
TDP2O95551 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC27.99■■■□□ 2.07
TDP2O95551 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC27.98■■■□□ 2.07
TDP2O95551 AP004609.3-201ENST00000610705 1884 ntBASIC27.98■■■□□ 2.07
TDP2O95551 ECEL1P2-201ENST00000461596 1295 ntBASIC27.97■■■□□ 2.07
TDP2O95551 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC27.97■■■□□ 2.07
TDP2O95551 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC27.96■■■□□ 2.07
TDP2O95551 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC27.96■■■□□ 2.07
TDP2O95551 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC27.96■■■□□ 2.07
TDP2O95551 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC27.96■■■□□ 2.07
TDP2O95551 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC27.95■■■□□ 2.07
TDP2O95551 PKM-203ENST00000389093 2279 ntTSL 5 BASIC27.95■■■□□ 2.07
TDP2O95551 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC27.95■■■□□ 2.07
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms