Protein–RNA interactions for Protein: O75643

SNRNP200, U5 small nuclear ribonucleoprotein 200 kDa helicase, humanhuman

Known RBP Predictions only

Length 2,136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200O75643 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC23.9■■□□□ 1.42
SNRNP200O75643 AC025884.2-201ENST00000553429 711 ntBASIC23.9■■□□□ 1.42
SNRNP200O75643 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
SNRNP200O75643 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC23.9■■□□□ 1.42
SNRNP200O75643 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
SNRNP200O75643 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC23.89■■□□□ 1.42
SNRNP200O75643 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC23.88■■□□□ 1.41
SNRNP200O75643 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
SNRNP200O75643 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC23.88■■□□□ 1.41
SNRNP200O75643 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
SNRNP200O75643 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC23.87■■□□□ 1.41
SNRNP200O75643 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC23.87■■□□□ 1.41
SNRNP200O75643 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
SNRNP200O75643 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
SNRNP200O75643 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC23.86■■□□□ 1.41
SNRNP200O75643 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
SNRNP200O75643 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC23.86■■□□□ 1.41
SNRNP200O75643 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
SNRNP200O75643 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC23.86■■□□□ 1.41
SNRNP200O75643 HES4-202ENST00000428771 1040 ntTSL 2 BASIC23.86■■□□□ 1.41
SNRNP200O75643 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC23.85■■□□□ 1.41
SNRNP200O75643 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
SNRNP200O75643 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC23.85■■□□□ 1.41
SNRNP200O75643 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
SNRNP200O75643 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
SNRNP200O75643 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
SNRNP200O75643 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
SNRNP200O75643 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC23.84■■□□□ 1.41
SNRNP200O75643 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
SNRNP200O75643 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
SNRNP200O75643 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC23.84■■□□□ 1.41
SNRNP200O75643 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC23.84■■□□□ 1.41
SNRNP200O75643 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC23.83■■□□□ 1.41
SNRNP200O75643 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC23.83■■□□□ 1.4
SNRNP200O75643 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC23.83■■□□□ 1.4
SNRNP200O75643 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC23.82■■□□□ 1.4
SNRNP200O75643 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC23.82■■□□□ 1.4
SNRNP200O75643 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC23.82■■□□□ 1.4
SNRNP200O75643 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC23.82■■□□□ 1.4
SNRNP200O75643 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC23.82■■□□□ 1.4
SNRNP200O75643 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC23.82■■□□□ 1.4
SNRNP200O75643 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC23.82■■□□□ 1.4
SNRNP200O75643 AL359258.2-201ENST00000564063 1566 ntBASIC23.81■■□□□ 1.4
SNRNP200O75643 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC23.81■■□□□ 1.4
SNRNP200O75643 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC23.81■■□□□ 1.4
SNRNP200O75643 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
SNRNP200O75643 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC23.81■■□□□ 1.4
SNRNP200O75643 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
SNRNP200O75643 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
SNRNP200O75643 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
SNRNP200O75643 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
SNRNP200O75643 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
SNRNP200O75643 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
SNRNP200O75643 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
SNRNP200O75643 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC23.8■■□□□ 1.4
SNRNP200O75643 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC23.8■■□□□ 1.4
SNRNP200O75643 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC23.79■■□□□ 1.4
SNRNP200O75643 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
SNRNP200O75643 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
SNRNP200O75643 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
SNRNP200O75643 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC23.79■■□□□ 1.4
SNRNP200O75643 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC23.78■■□□□ 1.4
SNRNP200O75643 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
SNRNP200O75643 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC23.78■■□□□ 1.4
SNRNP200O75643 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC23.78■■□□□ 1.4
SNRNP200O75643 ABHD17AP5-201ENST00000580133 923 ntBASIC23.78■■□□□ 1.4
SNRNP200O75643 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
SNRNP200O75643 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
SNRNP200O75643 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
SNRNP200O75643 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC23.77■■□□□ 1.4
SNRNP200O75643 PKM-203ENST00000389093 2279 ntTSL 5 BASIC23.76■■□□□ 1.39
SNRNP200O75643 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
SNRNP200O75643 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC23.76■■□□□ 1.39
SNRNP200O75643 RNF126P1-201ENST00000567452 1320 ntBASIC23.76■■□□□ 1.39
SNRNP200O75643 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
SNRNP200O75643 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
SNRNP200O75643 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC23.74■■□□□ 1.39
SNRNP200O75643 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
SNRNP200O75643 AC126177.7-201ENST00000547904 679 ntBASIC23.74■■□□□ 1.39
SNRNP200O75643 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC23.74■■□□□ 1.39
SNRNP200O75643 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
SNRNP200O75643 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC23.74■■□□□ 1.39
SNRNP200O75643 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC23.73■■□□□ 1.39
SNRNP200O75643 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC23.73■■□□□ 1.39
SNRNP200O75643 HYI-213ENST00000583037 1322 ntTSL 5 BASIC23.73■■□□□ 1.39
SNRNP200O75643 REST-210ENST00000638187 1334 ntTSL 5 BASIC23.73■■□□□ 1.39
SNRNP200O75643 AL359504.2-201ENST00000605506 1601 ntBASIC23.72■■□□□ 1.39
SNRNP200O75643 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC23.72■■□□□ 1.39
SNRNP200O75643 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC23.72■■□□□ 1.39
SNRNP200O75643 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
SNRNP200O75643 AC093536.1-201ENST00000569153 554 ntBASIC23.72■■□□□ 1.39
SNRNP200O75643 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC23.72■■□□□ 1.39
SNRNP200O75643 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
SNRNP200O75643 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC23.71■■□□□ 1.39
SNRNP200O75643 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC23.71■■□□□ 1.39
SNRNP200O75643 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC23.7■■□□□ 1.39
SNRNP200O75643 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
SNRNP200O75643 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC23.7■■□□□ 1.38
SNRNP200O75643 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC23.69■■□□□ 1.38
SNRNP200O75643 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Retrieved 100 of 98,524 protein–RNA pairs in 100.1 ms