Protein–RNA interactions for Protein: O43924

PDE6D, Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit delta, humanhuman

Predictions only

Length 150 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6DO43924 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC19.1■□□□□ 0.65
PDE6DO43924 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC19.1■□□□□ 0.65
PDE6DO43924 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
PDE6DO43924 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PDE6DO43924 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PDE6DO43924 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
PDE6DO43924 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
PDE6DO43924 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC19.09■□□□□ 0.65
PDE6DO43924 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
PDE6DO43924 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC19.09■□□□□ 0.65
PDE6DO43924 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
PDE6DO43924 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
PDE6DO43924 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
PDE6DO43924 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
PDE6DO43924 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
PDE6DO43924 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
PDE6DO43924 CLEC3B-201ENST00000296130 936 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
PDE6DO43924 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
PDE6DO43924 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
PDE6DO43924 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC19.08■□□□□ 0.64
PDE6DO43924 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC19.08■□□□□ 0.64
PDE6DO43924 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
PDE6DO43924 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
PDE6DO43924 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
PDE6DO43924 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
PDE6DO43924 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
PDE6DO43924 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC19.07■□□□□ 0.64
PDE6DO43924 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
PDE6DO43924 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
PDE6DO43924 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
PDE6DO43924 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
PDE6DO43924 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
PDE6DO43924 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
PDE6DO43924 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
PDE6DO43924 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC19.06■□□□□ 0.64
PDE6DO43924 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PDE6DO43924 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
PDE6DO43924 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
PDE6DO43924 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PDE6DO43924 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC19.05■□□□□ 0.64
PDE6DO43924 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
PDE6DO43924 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC19.05■□□□□ 0.64
PDE6DO43924 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PDE6DO43924 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PDE6DO43924 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
PDE6DO43924 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PDE6DO43924 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PDE6DO43924 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PDE6DO43924 AC012676.1-201ENST00000574705 1949 ntBASIC19.04■□□□□ 0.64
PDE6DO43924 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PDE6DO43924 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
PDE6DO43924 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC19.03■□□□□ 0.64
PDE6DO43924 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC19.03■□□□□ 0.64
PDE6DO43924 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PDE6DO43924 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
PDE6DO43924 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
PDE6DO43924 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
PDE6DO43924 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
PDE6DO43924 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
PDE6DO43924 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC19.02■□□□□ 0.64
PDE6DO43924 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC19.02■□□□□ 0.64
PDE6DO43924 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC19.02■□□□□ 0.64
PDE6DO43924 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC19.02■□□□□ 0.64
PDE6DO43924 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
PDE6DO43924 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
PDE6DO43924 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
PDE6DO43924 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
PDE6DO43924 TMEM202-AS1-202ENST00000565181 2325 ntBASIC19.01■□□□□ 0.63
PDE6DO43924 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
PDE6DO43924 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC19.01■□□□□ 0.63
PDE6DO43924 PQLC1-211ENST00000590381 1247 ntTSL 2 BASIC19.01■□□□□ 0.63
PDE6DO43924 KLF16-203ENST00000592313 508 ntTSL 3 BASIC19.01■□□□□ 0.63
PDE6DO43924 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
PDE6DO43924 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
PDE6DO43924 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
PDE6DO43924 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PDE6DO43924 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PDE6DO43924 PREB-202ENST00000406567 1910 ntTSL 5 BASIC19■□□□□ 0.63
PDE6DO43924 ANAPC11-203ENST00000392376 687 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PDE6DO43924 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC19■□□□□ 0.63
PDE6DO43924 MED17-227ENST00000640521 2047 ntTSL 5 BASIC19■□□□□ 0.63
PDE6DO43924 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
PDE6DO43924 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC18.99■□□□□ 0.63
PDE6DO43924 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
PDE6DO43924 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC18.99■□□□□ 0.63
PDE6DO43924 AL139125.2-201ENST00000623134 1869 ntBASIC18.99■□□□□ 0.63
PDE6DO43924 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
PDE6DO43924 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PDE6DO43924 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC18.98■□□□□ 0.63
PDE6DO43924 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
PDE6DO43924 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PDE6DO43924 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC18.98■□□□□ 0.63
PDE6DO43924 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
PDE6DO43924 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
PDE6DO43924 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PDE6DO43924 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
PDE6DO43924 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PDE6DO43924 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
PDE6DO43924 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC18.96■□□□□ 0.63
PDE6DO43924 AC133561.1-201ENST00000568600 2415 ntBASIC18.96■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms