Protein–RNA interactions for Protein: O43508

TNFSF12, Tumor necrosis factor ligand superfamily member 12, humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF12O43508 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
TNFSF12O43508 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
TNFSF12O43508 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
TNFSF12O43508 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
TNFSF12O43508 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC20.41■□□□□ 0.86
TNFSF12O43508 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC20.41■□□□□ 0.86
TNFSF12O43508 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
TNFSF12O43508 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC20.41■□□□□ 0.86
TNFSF12O43508 AC020928.2-201ENST00000588717 2197 ntBASIC20.41■□□□□ 0.86
TNFSF12O43508 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
TNFSF12O43508 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
TNFSF12O43508 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
TNFSF12O43508 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.86
TNFSF12O43508 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
TNFSF12O43508 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
TNFSF12O43508 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
TNFSF12O43508 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
TNFSF12O43508 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
TNFSF12O43508 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC20.39■□□□□ 0.85
TNFSF12O43508 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC20.39■□□□□ 0.85
TNFSF12O43508 AC092803.2-201ENST00000564287 1899 ntBASIC20.39■□□□□ 0.85
TNFSF12O43508 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
TNFSF12O43508 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC20.38■□□□□ 0.85
TNFSF12O43508 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
TNFSF12O43508 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC20.38■□□□□ 0.85
TNFSF12O43508 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC20.38■□□□□ 0.85
TNFSF12O43508 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
TNFSF12O43508 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
TNFSF12O43508 AC110285.7-201ENST00000624417 1536 ntBASIC20.37■□□□□ 0.85
TNFSF12O43508 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
TNFSF12O43508 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
TNFSF12O43508 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
TNFSF12O43508 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC20.37■□□□□ 0.85
TNFSF12O43508 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC20.37■□□□□ 0.85
TNFSF12O43508 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
TNFSF12O43508 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
TNFSF12O43508 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
TNFSF12O43508 AP006261.1-201ENST00000584783 668 ntBASIC20.35■□□□□ 0.85
TNFSF12O43508 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
TNFSF12O43508 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC20.34■□□□□ 0.85
TNFSF12O43508 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC20.34■□□□□ 0.85
TNFSF12O43508 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
TNFSF12O43508 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC20.34■□□□□ 0.85
TNFSF12O43508 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
TNFSF12O43508 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
TNFSF12O43508 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC20.34■□□□□ 0.85
TNFSF12O43508 PKM-204ENST00000449901 2526 ntTSL 2 BASIC20.34■□□□□ 0.85
TNFSF12O43508 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
TNFSF12O43508 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC20.33■□□□□ 0.85
TNFSF12O43508 AC087741.3-201ENST00000624270 1347 ntBASIC20.33■□□□□ 0.85
TNFSF12O43508 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
TNFSF12O43508 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
TNFSF12O43508 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC20.33■□□□□ 0.85
TNFSF12O43508 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
TNFSF12O43508 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC20.33■□□□□ 0.85
TNFSF12O43508 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC20.33■□□□□ 0.84
TNFSF12O43508 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
TNFSF12O43508 DUSP8P4-201ENST00000399538 1761 ntBASIC20.32■□□□□ 0.84
TNFSF12O43508 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC20.32■□□□□ 0.84
TNFSF12O43508 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC20.32■□□□□ 0.84
TNFSF12O43508 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
TNFSF12O43508 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
TNFSF12O43508 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
TNFSF12O43508 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
TNFSF12O43508 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
TNFSF12O43508 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
TNFSF12O43508 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
TNFSF12O43508 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
TNFSF12O43508 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
TNFSF12O43508 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
TNFSF12O43508 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC20.3■□□□□ 0.84
TNFSF12O43508 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
TNFSF12O43508 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC20.3■□□□□ 0.84
TNFSF12O43508 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
TNFSF12O43508 NRG1-221ENST00000614767 762 ntTSL 5 BASIC20.3■□□□□ 0.84
TNFSF12O43508 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC20.3■□□□□ 0.84
TNFSF12O43508 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
TNFSF12O43508 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TNFSF12O43508 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
TNFSF12O43508 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC20.29■□□□□ 0.84
TNFSF12O43508 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC20.29■□□□□ 0.84
TNFSF12O43508 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC20.29■□□□□ 0.84
TNFSF12O43508 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TNFSF12O43508 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TNFSF12O43508 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
TNFSF12O43508 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC20.28■□□□□ 0.84
TNFSF12O43508 PEX7-203ENST00000541292 945 ntTSL 5 BASIC20.28■□□□□ 0.84
TNFSF12O43508 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
TNFSF12O43508 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
TNFSF12O43508 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
TNFSF12O43508 AC142472.1-201ENST00000612013 1741 ntBASIC20.27■□□□□ 0.84
TNFSF12O43508 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
TNFSF12O43508 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
TNFSF12O43508 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC20.27■□□□□ 0.84
TNFSF12O43508 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
TNFSF12O43508 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
TNFSF12O43508 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
TNFSF12O43508 AL162393.1-201ENST00000437852 946 ntBASIC20.27■□□□□ 0.84
TNFSF12O43508 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC20.27■□□□□ 0.84
TNFSF12O43508 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 65.3 ms