Protein–RNA interactions for Protein: O43189

PHF1, PHD finger protein 1, humanhuman

Predicted RBP Predictions only

Length 567 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1O43189 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
PHF1O43189 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
PHF1O43189 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
PHF1O43189 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
PHF1O43189 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
PHF1O43189 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
PHF1O43189 AL033527.3-201ENST00000566366 1196 ntBASIC21.17■□□□□ 0.98
PHF1O43189 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
PHF1O43189 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
PHF1O43189 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
PHF1O43189 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC21.17■□□□□ 0.98
PHF1O43189 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
PHF1O43189 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC21.16■□□□□ 0.98
PHF1O43189 AP004833.2-201ENST00000532228 1454 ntBASIC21.16■□□□□ 0.98
PHF1O43189 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
PHF1O43189 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
PHF1O43189 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
PHF1O43189 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
PHF1O43189 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
PHF1O43189 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC21.15■□□□□ 0.98
PHF1O43189 SHF-208ENST00000560734 1731 ntTSL 3 BASIC21.15■□□□□ 0.98
PHF1O43189 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.98
PHF1O43189 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
PHF1O43189 AC100797.4-201ENST00000631653 1827 ntBASIC21.14■□□□□ 0.97
PHF1O43189 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
PHF1O43189 AC008813.1-201ENST00000536597 885 ntBASIC21.14■□□□□ 0.97
PHF1O43189 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
PHF1O43189 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC21.14■□□□□ 0.97
PHF1O43189 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC21.14■□□□□ 0.97
PHF1O43189 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
PHF1O43189 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
PHF1O43189 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
PHF1O43189 AC022413.1-201ENST00000624602 984 ntBASIC21.13■□□□□ 0.97
PHF1O43189 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC21.13■□□□□ 0.97
PHF1O43189 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC21.12■□□□□ 0.97
PHF1O43189 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
PHF1O43189 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC21.12■□□□□ 0.97
PHF1O43189 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
PHF1O43189 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
PHF1O43189 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
PHF1O43189 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
PHF1O43189 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
PHF1O43189 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC21.11■□□□□ 0.97
PHF1O43189 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
PHF1O43189 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
PHF1O43189 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
PHF1O43189 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
PHF1O43189 HES4-202ENST00000428771 1040 ntTSL 2 BASIC21.1■□□□□ 0.97
PHF1O43189 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC21.1■□□□□ 0.97
PHF1O43189 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC21.1■□□□□ 0.97
PHF1O43189 LINC01003-201ENST00000564834 1764 ntBASIC21.1■□□□□ 0.97
PHF1O43189 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
PHF1O43189 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
PHF1O43189 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC21.09■□□□□ 0.97
PHF1O43189 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC21.09■□□□□ 0.97
PHF1O43189 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC21.09■□□□□ 0.97
PHF1O43189 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
PHF1O43189 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
PHF1O43189 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC21.08■□□□□ 0.97
PHF1O43189 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC21.08■□□□□ 0.97
PHF1O43189 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC21.08■□□□□ 0.97
PHF1O43189 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
PHF1O43189 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
PHF1O43189 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
PHF1O43189 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
PHF1O43189 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC21.07■□□□□ 0.96
PHF1O43189 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC21.07■□□□□ 0.96
PHF1O43189 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
PHF1O43189 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
PHF1O43189 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
PHF1O43189 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
PHF1O43189 AC135731.1-201ENST00000569415 2548 ntBASIC21.06■□□□□ 0.96
PHF1O43189 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
PHF1O43189 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC21.06■□□□□ 0.96
PHF1O43189 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
PHF1O43189 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
PHF1O43189 PEX7-203ENST00000541292 945 ntTSL 5 BASIC21.05■□□□□ 0.96
PHF1O43189 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC21.05■□□□□ 0.96
PHF1O43189 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC21.05■□□□□ 0.96
PHF1O43189 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
PHF1O43189 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC21.04■□□□□ 0.96
PHF1O43189 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
PHF1O43189 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
PHF1O43189 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
PHF1O43189 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
PHF1O43189 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC21.04■□□□□ 0.96
PHF1O43189 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC21.03■□□□□ 0.96
PHF1O43189 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
PHF1O43189 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
PHF1O43189 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
PHF1O43189 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
PHF1O43189 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
PHF1O43189 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
PHF1O43189 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC21.02■□□□□ 0.96
PHF1O43189 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC21.02■□□□□ 0.96
PHF1O43189 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC21.02■□□□□ 0.96
PHF1O43189 RPS2-210ENST00000530225 765 ntTSL 2 BASIC21.02■□□□□ 0.96
PHF1O43189 CHST11-203ENST00000547956 936 ntTSL 2 BASIC21.02■□□□□ 0.96
PHF1O43189 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
PHF1O43189 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 19.6 ms