Protein–RNA interactions for Protein: I3L3M4

Claudin, humanhuman

Predictions only

Length 83 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
I3L3M4 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC17.49■□□□□ 0.39
I3L3M4 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC17.49■□□□□ 0.39
I3L3M4 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
I3L3M4 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC17.48■□□□□ 0.39
I3L3M4 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
I3L3M4 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
I3L3M4 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC17.48■□□□□ 0.39
I3L3M4 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
I3L3M4 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
I3L3M4 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
I3L3M4 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
I3L3M4 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
I3L3M4 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
I3L3M4 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC17.46■□□□□ 0.39
I3L3M4 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
I3L3M4 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
I3L3M4 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC17.45■□□□□ 0.38
I3L3M4 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC17.45■□□□□ 0.38
I3L3M4 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
I3L3M4 MIR6090-201ENST00000622481 60 ntBASIC17.45■□□□□ 0.38
I3L3M4 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
I3L3M4 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
I3L3M4 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
I3L3M4 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
I3L3M4 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
I3L3M4 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
I3L3M4 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC17.44■□□□□ 0.38
I3L3M4 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
I3L3M4 AC142472.1-201ENST00000612013 1741 ntBASIC17.44■□□□□ 0.38
I3L3M4 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC17.44■□□□□ 0.38
I3L3M4 PKM-204ENST00000449901 2526 ntTSL 2 BASIC17.44■□□□□ 0.38
I3L3M4 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC17.44■□□□□ 0.38
I3L3M4 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
I3L3M4 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
I3L3M4 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
I3L3M4 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
I3L3M4 HNRNPLP2-201ENST00000568980 1570 ntBASIC17.44■□□□□ 0.38
I3L3M4 SNAI3-AS1-204ENST00000567997 2048 ntBASIC17.43■□□□□ 0.38
I3L3M4 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
I3L3M4 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
I3L3M4 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
I3L3M4 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
I3L3M4 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
I3L3M4 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
I3L3M4 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
I3L3M4 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC17.43■□□□□ 0.38
I3L3M4 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
I3L3M4 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
I3L3M4 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
I3L3M4 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
I3L3M4 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC17.41■□□□□ 0.38
I3L3M4 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC17.41■□□□□ 0.38
I3L3M4 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC17.41■□□□□ 0.38
I3L3M4 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
I3L3M4 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC17.41■□□□□ 0.38
I3L3M4 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
I3L3M4 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC17.4■□□□□ 0.38
I3L3M4 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC17.4■□□□□ 0.38
I3L3M4 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
I3L3M4 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
I3L3M4 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
I3L3M4 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
I3L3M4 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC17.4■□□□□ 0.38
I3L3M4 SUZ12P1-203ENST00000578195 985 ntBASIC17.4■□□□□ 0.38
I3L3M4 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
I3L3M4 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC17.39■□□□□ 0.37
I3L3M4 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
I3L3M4 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC17.39■□□□□ 0.37
I3L3M4 CALM3-209ENST00000597743 577 ntTSL 4 BASIC17.39■□□□□ 0.37
I3L3M4 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC17.39■□□□□ 0.37
I3L3M4 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC17.39■□□□□ 0.37
I3L3M4 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
I3L3M4 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC17.39■□□□□ 0.37
I3L3M4 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
I3L3M4 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
I3L3M4 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
I3L3M4 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
I3L3M4 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
I3L3M4 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
I3L3M4 WHAMMP3-201ENST00000611636 1609 ntBASIC17.37■□□□□ 0.37
I3L3M4 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC17.37■□□□□ 0.37
I3L3M4 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
I3L3M4 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
I3L3M4 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
I3L3M4 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
I3L3M4 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
I3L3M4 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
I3L3M4 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC17.37■□□□□ 0.37
I3L3M4 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC17.36■□□□□ 0.37
I3L3M4 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
I3L3M4 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC17.36■□□□□ 0.37
I3L3M4 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC17.36■□□□□ 0.37
I3L3M4 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
I3L3M4 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC17.36■□□□□ 0.37
I3L3M4 AC093323.1-202ENST00000635031 2045 ntBASIC17.35■□□□□ 0.37
I3L3M4 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC17.35■□□□□ 0.37
I3L3M4 AC110285.7-201ENST00000624417 1536 ntBASIC17.35■□□□□ 0.37
I3L3M4 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC17.35■□□□□ 0.37
I3L3M4 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC17.35■□□□□ 0.37
I3L3M4 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms