Protein–RNA interactions for Protein: D6R901

USP17L21, Ubiquitin carboxyl-terminal hydrolase 17-like protein 21, humanhuman

Predictions only

Length 530 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP17L21D6R901 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC29.52■■■□□ 2.32
USP17L21D6R901 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC29.52■■■□□ 2.32
USP17L21D6R901 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC29.52■■■□□ 2.32
USP17L21D6R901 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC29.52■■■□□ 2.32
USP17L21D6R901 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC29.51■■■□□ 2.32
USP17L21D6R901 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC29.51■■■□□ 2.31
USP17L21D6R901 HYI-213ENST00000583037 1322 ntTSL 5 BASIC29.5■■■□□ 2.31
USP17L21D6R901 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC29.49■■■□□ 2.31
USP17L21D6R901 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC29.49■■■□□ 2.31
USP17L21D6R901 SMPD5-203ENST00000639008 1464 ntBASIC29.48■■■□□ 2.31
USP17L21D6R901 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC29.48■■■□□ 2.31
USP17L21D6R901 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC29.48■■■□□ 2.31
USP17L21D6R901 NTF6A-201ENST00000591175 560 ntBASIC29.48■■■□□ 2.31
USP17L21D6R901 U85056.1-201ENST00000616429 682 ntBASIC29.48■■■□□ 2.31
USP17L21D6R901 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC29.48■■■□□ 2.31
USP17L21D6R901 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC29.48■■■□□ 2.31
USP17L21D6R901 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC29.47■■■□□ 2.31
USP17L21D6R901 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC29.47■■■□□ 2.31
USP17L21D6R901 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC29.47■■■□□ 2.31
USP17L21D6R901 AC142086.6-201ENST00000621154 1765 ntBASIC29.47■■■□□ 2.31
USP17L21D6R901 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC29.46■■■□□ 2.31
USP17L21D6R901 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC29.46■■■□□ 2.31
USP17L21D6R901 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC29.46■■■□□ 2.31
USP17L21D6R901 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC29.46■■■□□ 2.31
USP17L21D6R901 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC29.46■■■□□ 2.31
USP17L21D6R901 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC29.46■■■□□ 2.31
USP17L21D6R901 AC025884.2-201ENST00000553429 711 ntBASIC29.45■■■□□ 2.31
USP17L21D6R901 AC007029.1-201ENST00000604183 313 ntBASIC29.45■■■□□ 2.31
USP17L21D6R901 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC29.45■■■□□ 2.3
USP17L21D6R901 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC29.45■■■□□ 2.3
USP17L21D6R901 REST-210ENST00000638187 1334 ntTSL 5 BASIC29.45■■■□□ 2.3
USP17L21D6R901 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC29.44■■■□□ 2.3
USP17L21D6R901 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC29.44■■■□□ 2.3
USP17L21D6R901 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC29.44■■■□□ 2.3
USP17L21D6R901 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC29.44■■■□□ 2.3
USP17L21D6R901 BX255925.1-201ENST00000566954 1854 ntBASIC29.43■■■□□ 2.3
USP17L21D6R901 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC29.43■■■□□ 2.3
USP17L21D6R901 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC29.43■■■□□ 2.3
USP17L21D6R901 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC29.43■■■□□ 2.3
USP17L21D6R901 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC29.42■■■□□ 2.3
USP17L21D6R901 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC29.42■■■□□ 2.3
USP17L21D6R901 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC29.42■■■□□ 2.3
USP17L21D6R901 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC29.42■■■□□ 2.3
USP17L21D6R901 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC29.42■■■□□ 2.3
USP17L21D6R901 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC29.41■■■□□ 2.3
USP17L21D6R901 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC29.41■■■□□ 2.3
USP17L21D6R901 AL359504.2-201ENST00000605506 1601 ntBASIC29.41■■■□□ 2.3
USP17L21D6R901 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC29.4■■■□□ 2.3
USP17L21D6R901 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC29.4■■■□□ 2.3
USP17L21D6R901 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC29.4■■■□□ 2.3
USP17L21D6R901 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC29.4■■■□□ 2.3
USP17L21D6R901 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC29.39■■■□□ 2.3
USP17L21D6R901 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC29.39■■■□□ 2.3
USP17L21D6R901 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC29.39■■■□□ 2.3
USP17L21D6R901 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC29.39■■■□□ 2.3
USP17L21D6R901 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC29.38■■■□□ 2.29
USP17L21D6R901 AL449106.1-201ENST00000608517 1980 ntBASIC29.38■■■□□ 2.29
USP17L21D6R901 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC29.38■■■□□ 2.29
USP17L21D6R901 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC29.37■■■□□ 2.29
USP17L21D6R901 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC29.36■■■□□ 2.29
USP17L21D6R901 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC29.36■■■□□ 2.29
USP17L21D6R901 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC29.36■■■□□ 2.29
USP17L21D6R901 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC29.36■■■□□ 2.29
USP17L21D6R901 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC29.36■■■□□ 2.29
USP17L21D6R901 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC29.34■■■□□ 2.29
USP17L21D6R901 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC29.34■■■□□ 2.29
USP17L21D6R901 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC29.34■■■□□ 2.29
USP17L21D6R901 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC29.34■■■□□ 2.29
USP17L21D6R901 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC29.34■■■□□ 2.29
USP17L21D6R901 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC29.34■■■□□ 2.29
USP17L21D6R901 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC29.34■■■□□ 2.29
USP17L21D6R901 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC29.33■■■□□ 2.29
USP17L21D6R901 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC29.33■■■□□ 2.29
USP17L21D6R901 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC29.33■■■□□ 2.29
USP17L21D6R901 AC009831.1-201ENST00000580420 1582 ntBASIC29.32■■■□□ 2.28
USP17L21D6R901 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC29.32■■■□□ 2.28
USP17L21D6R901 KRT18P60-201ENST00000312876 1297 ntBASIC29.32■■■□□ 2.28
USP17L21D6R901 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC29.32■■■□□ 2.28
USP17L21D6R901 PFN2-211ENST00000489155 636 ntTSL 4 BASIC29.32■■■□□ 2.28
USP17L21D6R901 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC29.31■■■□□ 2.28
USP17L21D6R901 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC29.31■■■□□ 2.28
USP17L21D6R901 RP9P-202ENST00000450133 1212 ntBASIC29.31■■■□□ 2.28
USP17L21D6R901 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC29.31■■■□□ 2.28
USP17L21D6R901 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC29.31■■■□□ 2.28
USP17L21D6R901 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC29.31■■■□□ 2.28
USP17L21D6R901 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC29.31■■■□□ 2.28
USP17L21D6R901 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC29.3■■■□□ 2.28
USP17L21D6R901 AC026202.3-201ENST00000600805 1127 ntBASIC29.3■■■□□ 2.28
USP17L21D6R901 AC133552.2-201ENST00000619106 1032 ntBASIC29.3■■■□□ 2.28
USP17L21D6R901 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC29.3■■■□□ 2.28
USP17L21D6R901 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC29.29■■■□□ 2.28
USP17L21D6R901 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC29.29■■■□□ 2.28
USP17L21D6R901 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC29.29■■■□□ 2.28
USP17L21D6R901 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC29.29■■■□□ 2.28
USP17L21D6R901 GFER-205ENST00000569451 517 ntTSL 5 BASIC29.29■■■□□ 2.28
USP17L21D6R901 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC29.29■■■□□ 2.28
USP17L21D6R901 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC29.28■■■□□ 2.28
USP17L21D6R901 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC29.28■■■□□ 2.28
USP17L21D6R901 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC29.28■■■□□ 2.28
USP17L21D6R901 AC093536.1-201ENST00000569153 554 ntBASIC29.28■■■□□ 2.28
Retrieved 100 of 98,524 protein–RNA pairs in 19.8 ms