Protein–RNA interactions for Protein: A6NKF7

TMEM88B, Transmembrane protein 88B, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88BA6NKF7 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC29.7■■■□□ 2.35
TMEM88BA6NKF7 IDNK-203ENST00000405990 629 ntTSL 2 BASIC29.7■■■□□ 2.35
TMEM88BA6NKF7 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC29.7■■■□□ 2.35
TMEM88BA6NKF7 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC29.7■■■□□ 2.34
TMEM88BA6NKF7 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC29.69■■■□□ 2.34
TMEM88BA6NKF7 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC29.69■■■□□ 2.34
TMEM88BA6NKF7 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC29.69■■■□□ 2.34
TMEM88BA6NKF7 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC29.68■■■□□ 2.34
TMEM88BA6NKF7 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC29.68■■■□□ 2.34
TMEM88BA6NKF7 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC29.67■■■□□ 2.34
TMEM88BA6NKF7 SAMD1-202ENST00000533683 2164 ntAPPRIS P5 TSL 1 (best) BASIC29.66■■■□□ 2.34
TMEM88BA6NKF7 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC29.66■■■□□ 2.34
TMEM88BA6NKF7 MIR3960-201ENST00000583311 91 ntBASIC29.66■■■□□ 2.34
TMEM88BA6NKF7 AL139246.5-201ENST00000606645 996 ntBASIC29.66■■■□□ 2.34
TMEM88BA6NKF7 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC29.65■■■□□ 2.34
TMEM88BA6NKF7 PFN2-211ENST00000489155 636 ntTSL 4 BASIC29.65■■■□□ 2.34
TMEM88BA6NKF7 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC29.65■■■□□ 2.34
TMEM88BA6NKF7 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC29.64■■■□□ 2.34
TMEM88BA6NKF7 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC29.64■■■□□ 2.34
TMEM88BA6NKF7 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC29.64■■■□□ 2.34
TMEM88BA6NKF7 C7orf50-202ENST00000397098 2131 ntAPPRIS P2 TSL 1 (best) BASIC29.64■■■□□ 2.34
TMEM88BA6NKF7 RALB-208ENST00000631312 311 ntTSL 5 BASIC29.64■■■□□ 2.34
TMEM88BA6NKF7 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC29.64■■■□□ 2.34
TMEM88BA6NKF7 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC29.64■■■□□ 2.34
TMEM88BA6NKF7 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC29.63■■■□□ 2.33
TMEM88BA6NKF7 TK2-216ENST00000564917 1156 ntTSL 3 BASIC29.63■■■□□ 2.33
TMEM88BA6NKF7 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC29.62■■■□□ 2.33
TMEM88BA6NKF7 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC29.62■■■□□ 2.33
TMEM88BA6NKF7 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC29.62■■■□□ 2.33
TMEM88BA6NKF7 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC29.62■■■□□ 2.33
TMEM88BA6NKF7 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC29.62■■■□□ 2.33
TMEM88BA6NKF7 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC29.62■■■□□ 2.33
TMEM88BA6NKF7 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC29.61■■■□□ 2.33
TMEM88BA6NKF7 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC29.61■■■□□ 2.33
TMEM88BA6NKF7 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC29.6■■■□□ 2.33
TMEM88BA6NKF7 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC29.6■■■□□ 2.33
TMEM88BA6NKF7 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC29.6■■■□□ 2.33
TMEM88BA6NKF7 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC29.6■■■□□ 2.33
TMEM88BA6NKF7 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC29.6■■■□□ 2.33
TMEM88BA6NKF7 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC29.6■■■□□ 2.33
TMEM88BA6NKF7 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC29.59■■■□□ 2.33
TMEM88BA6NKF7 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC29.59■■■□□ 2.33
TMEM88BA6NKF7 RASSF7-202ENST00000397583 1928 ntAPPRIS P3 TSL 1 (best) BASIC29.59■■■□□ 2.33
TMEM88BA6NKF7 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC29.58■■■□□ 2.33
TMEM88BA6NKF7 NALT1-201ENST00000429224 738 ntTSL 5 BASIC29.58■■■□□ 2.33
TMEM88BA6NKF7 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC29.58■■■□□ 2.33
TMEM88BA6NKF7 CHST12-204ENST00000618655 2131 ntAPPRIS P1 TSL 1 (best) BASIC29.58■■■□□ 2.33
TMEM88BA6NKF7 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC29.57■■■□□ 2.32
TMEM88BA6NKF7 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC29.57■■■□□ 2.32
TMEM88BA6NKF7 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC29.57■■■□□ 2.32
TMEM88BA6NKF7 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC29.57■■■□□ 2.32
TMEM88BA6NKF7 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC29.57■■■□□ 2.32
TMEM88BA6NKF7 AC019171.1-201ENST00000601251 1056 ntBASIC29.57■■■□□ 2.32
TMEM88BA6NKF7 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC29.56■■■□□ 2.32
TMEM88BA6NKF7 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC29.56■■■□□ 2.32
TMEM88BA6NKF7 SH3GLB2-201ENST00000372554 1985 ntTSL 1 (best) BASIC29.56■■■□□ 2.32
TMEM88BA6NKF7 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC29.56■■■□□ 2.32
TMEM88BA6NKF7 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC29.56■■■□□ 2.32
TMEM88BA6NKF7 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC29.56■■■□□ 2.32
TMEM88BA6NKF7 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC29.55■■■□□ 2.32
TMEM88BA6NKF7 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC29.55■■■□□ 2.32
TMEM88BA6NKF7 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC29.55■■■□□ 2.32
TMEM88BA6NKF7 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC29.55■■■□□ 2.32
TMEM88BA6NKF7 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC29.55■■■□□ 2.32
TMEM88BA6NKF7 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC29.54■■■□□ 2.32
TMEM88BA6NKF7 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC29.54■■■□□ 2.32
TMEM88BA6NKF7 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC29.54■■■□□ 2.32
TMEM88BA6NKF7 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC29.54■■■□□ 2.32
TMEM88BA6NKF7 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC29.53■■■□□ 2.32
TMEM88BA6NKF7 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC29.53■■■□□ 2.32
TMEM88BA6NKF7 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC29.53■■■□□ 2.32
TMEM88BA6NKF7 LONRF2P2-201ENST00000439212 571 ntBASIC29.52■■■□□ 2.32
TMEM88BA6NKF7 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC29.52■■■□□ 2.32
TMEM88BA6NKF7 KRT125P-201ENST00000546827 989 ntBASIC29.52■■■□□ 2.32
TMEM88BA6NKF7 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC29.52■■■□□ 2.32
TMEM88BA6NKF7 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC29.52■■■□□ 2.32
TMEM88BA6NKF7 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC29.51■■■□□ 2.31
TMEM88BA6NKF7 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC29.51■■■□□ 2.31
TMEM88BA6NKF7 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC29.51■■■□□ 2.31
TMEM88BA6NKF7 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC29.5■■■□□ 2.31
TMEM88BA6NKF7 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC29.5■■■□□ 2.31
TMEM88BA6NKF7 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC29.5■■■□□ 2.31
TMEM88BA6NKF7 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC29.5■■■□□ 2.31
TMEM88BA6NKF7 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC29.5■■■□□ 2.31
TMEM88BA6NKF7 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC29.5■■■□□ 2.31
TMEM88BA6NKF7 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC29.5■■■□□ 2.31
TMEM88BA6NKF7 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC29.49■■■□□ 2.31
TMEM88BA6NKF7 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC29.49■■■□□ 2.31
TMEM88BA6NKF7 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC29.49■■■□□ 2.31
TMEM88BA6NKF7 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC29.49■■■□□ 2.31
TMEM88BA6NKF7 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC29.49■■■□□ 2.31
TMEM88BA6NKF7 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC29.49■■■□□ 2.31
TMEM88BA6NKF7 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC29.49■■■□□ 2.31
TMEM88BA6NKF7 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC29.49■■■□□ 2.31
TMEM88BA6NKF7 MIR4787-201ENST00000607364 84 ntBASIC29.49■■■□□ 2.31
TMEM88BA6NKF7 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC29.49■■■□□ 2.31
TMEM88BA6NKF7 AC092666.2-201ENST00000613287 246 ntBASIC29.49■■■□□ 2.31
TMEM88BA6NKF7 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC29.48■■■□□ 2.31
TMEM88BA6NKF7 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC29.48■■■□□ 2.31
TMEM88BA6NKF7 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC29.48■■■□□ 2.31
Retrieved 100 of 98,524 protein–RNA pairs in 13.6 ms