Protein–RNA interactions for Protein: A6NCL2

LRCOL1, Leucine-rich colipase-like protein 1, humanhuman

Predictions only

Length 159 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCOL1A6NCL2 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
LRCOL1A6NCL2 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
LRCOL1A6NCL2 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
LRCOL1A6NCL2 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
LRCOL1A6NCL2 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC16.44■□□□□ 0.22
LRCOL1A6NCL2 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
LRCOL1A6NCL2 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC16.44■□□□□ 0.22
LRCOL1A6NCL2 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
LRCOL1A6NCL2 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC16.44■□□□□ 0.22
LRCOL1A6NCL2 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC16.44■□□□□ 0.22
LRCOL1A6NCL2 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
LRCOL1A6NCL2 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC16.44■□□□□ 0.22
LRCOL1A6NCL2 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
LRCOL1A6NCL2 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
LRCOL1A6NCL2 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC16.43■□□□□ 0.22
LRCOL1A6NCL2 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
LRCOL1A6NCL2 NTF6A-201ENST00000591175 560 ntBASIC16.43■□□□□ 0.22
LRCOL1A6NCL2 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC16.43■□□□□ 0.22
LRCOL1A6NCL2 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
LRCOL1A6NCL2 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
LRCOL1A6NCL2 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC16.43■□□□□ 0.22
LRCOL1A6NCL2 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
LRCOL1A6NCL2 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
LRCOL1A6NCL2 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC16.42■□□□□ 0.22
LRCOL1A6NCL2 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
LRCOL1A6NCL2 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
LRCOL1A6NCL2 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
LRCOL1A6NCL2 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
LRCOL1A6NCL2 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
LRCOL1A6NCL2 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC16.41■□□□□ 0.22
LRCOL1A6NCL2 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
LRCOL1A6NCL2 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC16.41■□□□□ 0.22
LRCOL1A6NCL2 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
LRCOL1A6NCL2 DRD5P2-201ENST00000421395 2012 ntBASIC16.41■□□□□ 0.22
LRCOL1A6NCL2 HYI-213ENST00000583037 1322 ntTSL 5 BASIC16.41■□□□□ 0.22
LRCOL1A6NCL2 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
LRCOL1A6NCL2 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC16.4■□□□□ 0.22
LRCOL1A6NCL2 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
LRCOL1A6NCL2 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC16.4■□□□□ 0.22
LRCOL1A6NCL2 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC16.4■□□□□ 0.22
LRCOL1A6NCL2 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
LRCOL1A6NCL2 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
LRCOL1A6NCL2 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC16.39■□□□□ 0.21
LRCOL1A6NCL2 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC16.39■□□□□ 0.21
LRCOL1A6NCL2 U85056.1-201ENST00000616429 682 ntBASIC16.39■□□□□ 0.21
LRCOL1A6NCL2 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
LRCOL1A6NCL2 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
LRCOL1A6NCL2 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
LRCOL1A6NCL2 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
LRCOL1A6NCL2 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
LRCOL1A6NCL2 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
LRCOL1A6NCL2 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC16.38■□□□□ 0.21
LRCOL1A6NCL2 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC16.38■□□□□ 0.21
LRCOL1A6NCL2 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
LRCOL1A6NCL2 REST-210ENST00000638187 1334 ntTSL 5 BASIC16.38■□□□□ 0.21
LRCOL1A6NCL2 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
LRCOL1A6NCL2 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
LRCOL1A6NCL2 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
LRCOL1A6NCL2 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
LRCOL1A6NCL2 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
LRCOL1A6NCL2 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
LRCOL1A6NCL2 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
LRCOL1A6NCL2 SMPD5-203ENST00000639008 1464 ntBASIC16.36■□□□□ 0.21
LRCOL1A6NCL2 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
LRCOL1A6NCL2 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC16.36■□□□□ 0.21
LRCOL1A6NCL2 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
LRCOL1A6NCL2 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
LRCOL1A6NCL2 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
LRCOL1A6NCL2 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC16.36■□□□□ 0.21
LRCOL1A6NCL2 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC16.36■□□□□ 0.21
LRCOL1A6NCL2 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
LRCOL1A6NCL2 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
LRCOL1A6NCL2 AC025884.2-201ENST00000553429 711 ntBASIC16.36■□□□□ 0.21
LRCOL1A6NCL2 AC007029.1-201ENST00000604183 313 ntBASIC16.36■□□□□ 0.21
LRCOL1A6NCL2 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
LRCOL1A6NCL2 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
LRCOL1A6NCL2 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
LRCOL1A6NCL2 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
LRCOL1A6NCL2 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC16.35■□□□□ 0.21
LRCOL1A6NCL2 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC16.35■□□□□ 0.21
LRCOL1A6NCL2 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
LRCOL1A6NCL2 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
LRCOL1A6NCL2 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
LRCOL1A6NCL2 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
LRCOL1A6NCL2 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
LRCOL1A6NCL2 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC16.34■□□□□ 0.21
LRCOL1A6NCL2 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
LRCOL1A6NCL2 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC16.34■□□□□ 0.21
LRCOL1A6NCL2 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
LRCOL1A6NCL2 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.21
LRCOL1A6NCL2 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
LRCOL1A6NCL2 AC012354.3-201ENST00000623734 483 ntBASIC16.33■□□□□ 0.2
LRCOL1A6NCL2 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC16.33■□□□□ 0.2
LRCOL1A6NCL2 WHAMMP3-201ENST00000611636 1609 ntBASIC16.33■□□□□ 0.2
LRCOL1A6NCL2 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
LRCOL1A6NCL2 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
LRCOL1A6NCL2 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
LRCOL1A6NCL2 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
LRCOL1A6NCL2 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
LRCOL1A6NCL2 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 18.6 ms