Protein–RNA interactions for Protein: A0A0A6YYK7

TRAV19, T-cell receptor alpha variable 19 (Fragment), humanhuman

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV19A0A0A6YYK7 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC25.8■■□□□ 1.72
TRAV19A0A0A6YYK7 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC25.8■■□□□ 1.72
TRAV19A0A0A6YYK7 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC25.8■■□□□ 1.72
TRAV19A0A0A6YYK7 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC25.8■■□□□ 1.72
TRAV19A0A0A6YYK7 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC25.8■■□□□ 1.72
TRAV19A0A0A6YYK7 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
TRAV19A0A0A6YYK7 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
TRAV19A0A0A6YYK7 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC25.79■■□□□ 1.72
TRAV19A0A0A6YYK7 PFN2-211ENST00000489155 636 ntTSL 4 BASIC25.79■■□□□ 1.72
TRAV19A0A0A6YYK7 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC25.79■■□□□ 1.72
TRAV19A0A0A6YYK7 AC093536.1-201ENST00000569153 554 ntBASIC25.79■■□□□ 1.72
TRAV19A0A0A6YYK7 AC129492.7-201ENST00000622992 756 ntBASIC25.79■■□□□ 1.72
TRAV19A0A0A6YYK7 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
TRAV19A0A0A6YYK7 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC25.78■■□□□ 1.72
TRAV19A0A0A6YYK7 MIR3960-201ENST00000583311 91 ntBASIC25.78■■□□□ 1.72
TRAV19A0A0A6YYK7 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
TRAV19A0A0A6YYK7 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
TRAV19A0A0A6YYK7 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC25.78■■□□□ 1.72
TRAV19A0A0A6YYK7 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC25.78■■□□□ 1.72
TRAV19A0A0A6YYK7 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC25.78■■□□□ 1.72
TRAV19A0A0A6YYK7 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC25.78■■□□□ 1.72
TRAV19A0A0A6YYK7 GUK1-208ENST00000366728 842 ntTSL 2 BASIC25.77■■□□□ 1.72
TRAV19A0A0A6YYK7 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC25.77■■□□□ 1.72
TRAV19A0A0A6YYK7 WHAMMP3-201ENST00000611636 1609 ntBASIC25.77■■□□□ 1.72
TRAV19A0A0A6YYK7 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC25.77■■□□□ 1.72
TRAV19A0A0A6YYK7 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC25.76■■□□□ 1.71
TRAV19A0A0A6YYK7 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC25.76■■□□□ 1.71
TRAV19A0A0A6YYK7 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC25.76■■□□□ 1.71
TRAV19A0A0A6YYK7 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC25.76■■□□□ 1.71
TRAV19A0A0A6YYK7 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC25.76■■□□□ 1.71
TRAV19A0A0A6YYK7 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC25.76■■□□□ 1.71
TRAV19A0A0A6YYK7 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC25.76■■□□□ 1.71
TRAV19A0A0A6YYK7 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC25.75■■□□□ 1.71
TRAV19A0A0A6YYK7 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC25.75■■□□□ 1.71
TRAV19A0A0A6YYK7 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC25.74■■□□□ 1.71
TRAV19A0A0A6YYK7 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC25.74■■□□□ 1.71
TRAV19A0A0A6YYK7 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC25.74■■□□□ 1.71
TRAV19A0A0A6YYK7 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC25.73■■□□□ 1.71
TRAV19A0A0A6YYK7 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
TRAV19A0A0A6YYK7 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
TRAV19A0A0A6YYK7 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
TRAV19A0A0A6YYK7 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC25.72■■□□□ 1.71
TRAV19A0A0A6YYK7 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
TRAV19A0A0A6YYK7 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
TRAV19A0A0A6YYK7 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC25.72■■□□□ 1.71
TRAV19A0A0A6YYK7 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC25.72■■□□□ 1.71
TRAV19A0A0A6YYK7 RAP2CP1-202ENST00000605179 643 ntBASIC25.72■■□□□ 1.71
TRAV19A0A0A6YYK7 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC25.72■■□□□ 1.71
TRAV19A0A0A6YYK7 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC25.72■■□□□ 1.71
TRAV19A0A0A6YYK7 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC25.72■■□□□ 1.71
TRAV19A0A0A6YYK7 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC25.72■■□□□ 1.71
TRAV19A0A0A6YYK7 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC25.71■■□□□ 1.71
TRAV19A0A0A6YYK7 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC25.71■■□□□ 1.71
TRAV19A0A0A6YYK7 AL359504.2-201ENST00000605506 1601 ntBASIC25.71■■□□□ 1.71
TRAV19A0A0A6YYK7 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC25.71■■□□□ 1.71
TRAV19A0A0A6YYK7 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC25.71■■□□□ 1.71
TRAV19A0A0A6YYK7 DRD5P2-201ENST00000421395 2012 ntBASIC25.7■■□□□ 1.7
TRAV19A0A0A6YYK7 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC25.7■■□□□ 1.7
TRAV19A0A0A6YYK7 DUX4L18-201ENST00000553347 1267 ntBASIC25.7■■□□□ 1.7
TRAV19A0A0A6YYK7 AC139426.1-201ENST00000568218 2529 ntBASIC25.7■■□□□ 1.7
TRAV19A0A0A6YYK7 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
TRAV19A0A0A6YYK7 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC25.69■■□□□ 1.7
TRAV19A0A0A6YYK7 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC25.69■■□□□ 1.7
TRAV19A0A0A6YYK7 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC25.69■■□□□ 1.7
TRAV19A0A0A6YYK7 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
TRAV19A0A0A6YYK7 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC25.68■■□□□ 1.7
TRAV19A0A0A6YYK7 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC25.68■■□□□ 1.7
TRAV19A0A0A6YYK7 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
TRAV19A0A0A6YYK7 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
TRAV19A0A0A6YYK7 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC25.67■■□□□ 1.7
TRAV19A0A0A6YYK7 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
TRAV19A0A0A6YYK7 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC25.67■■□□□ 1.7
TRAV19A0A0A6YYK7 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC25.67■■□□□ 1.7
TRAV19A0A0A6YYK7 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
TRAV19A0A0A6YYK7 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC25.67■■□□□ 1.7
TRAV19A0A0A6YYK7 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC25.66■■□□□ 1.7
TRAV19A0A0A6YYK7 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC25.66■■□□□ 1.7
TRAV19A0A0A6YYK7 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
TRAV19A0A0A6YYK7 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC25.65■■□□□ 1.7
TRAV19A0A0A6YYK7 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC25.65■■□□□ 1.7
TRAV19A0A0A6YYK7 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC25.65■■□□□ 1.7
TRAV19A0A0A6YYK7 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC25.65■■□□□ 1.7
TRAV19A0A0A6YYK7 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC25.65■■□□□ 1.7
TRAV19A0A0A6YYK7 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
TRAV19A0A0A6YYK7 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC25.64■■□□□ 1.7
TRAV19A0A0A6YYK7 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC25.64■■□□□ 1.7
TRAV19A0A0A6YYK7 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC25.64■■□□□ 1.7
TRAV19A0A0A6YYK7 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC25.64■■□□□ 1.7
TRAV19A0A0A6YYK7 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC25.64■■□□□ 1.7
TRAV19A0A0A6YYK7 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC25.64■■□□□ 1.7
TRAV19A0A0A6YYK7 DUX4L9-201ENST00000449051 1259 ntBASIC25.64■■□□□ 1.7
TRAV19A0A0A6YYK7 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC25.64■■□□□ 1.69
TRAV19A0A0A6YYK7 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC25.64■■□□□ 1.69
TRAV19A0A0A6YYK7 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC25.63■■□□□ 1.69
TRAV19A0A0A6YYK7 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC25.63■■□□□ 1.69
TRAV19A0A0A6YYK7 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC25.63■■□□□ 1.69
TRAV19A0A0A6YYK7 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
TRAV19A0A0A6YYK7 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC25.63■■□□□ 1.69
TRAV19A0A0A6YYK7 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
TRAV19A0A0A6YYK7 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms