Protein–RNA interactions for Protein: A0A0A6YYK4

TRBV7-1, T-cell receptor beta variable 7-1 (non-functional) (Fragment), humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV7-1A0A0A6YYK4 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC19.22■□□□□ 0.67
TRBV7-1A0A0A6YYK4 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
TRBV7-1A0A0A6YYK4 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC19.22■□□□□ 0.67
TRBV7-1A0A0A6YYK4 AC126177.7-201ENST00000547904 679 ntBASIC19.22■□□□□ 0.67
TRBV7-1A0A0A6YYK4 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
TRBV7-1A0A0A6YYK4 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TRBV7-1A0A0A6YYK4 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC19.21■□□□□ 0.67
TRBV7-1A0A0A6YYK4 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
TRBV7-1A0A0A6YYK4 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC19.21■□□□□ 0.67
TRBV7-1A0A0A6YYK4 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC19.21■□□□□ 0.67
TRBV7-1A0A0A6YYK4 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC19.21■□□□□ 0.67
TRBV7-1A0A0A6YYK4 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
TRBV7-1A0A0A6YYK4 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
TRBV7-1A0A0A6YYK4 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
TRBV7-1A0A0A6YYK4 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
TRBV7-1A0A0A6YYK4 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
TRBV7-1A0A0A6YYK4 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
TRBV7-1A0A0A6YYK4 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
TRBV7-1A0A0A6YYK4 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
TRBV7-1A0A0A6YYK4 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TRBV7-1A0A0A6YYK4 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TRBV7-1A0A0A6YYK4 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
TRBV7-1A0A0A6YYK4 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TRBV7-1A0A0A6YYK4 MIR639-201ENST00000384974 98 ntBASIC19.19■□□□□ 0.66
TRBV7-1A0A0A6YYK4 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC19.19■□□□□ 0.66
TRBV7-1A0A0A6YYK4 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
TRBV7-1A0A0A6YYK4 AP004609.3-201ENST00000610705 1884 ntBASIC19.19■□□□□ 0.66
TRBV7-1A0A0A6YYK4 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC19.19■□□□□ 0.66
TRBV7-1A0A0A6YYK4 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
TRBV7-1A0A0A6YYK4 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
TRBV7-1A0A0A6YYK4 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC19.18■□□□□ 0.66
TRBV7-1A0A0A6YYK4 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TRBV7-1A0A0A6YYK4 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
TRBV7-1A0A0A6YYK4 AC142472.1-201ENST00000612013 1741 ntBASIC19.17■□□□□ 0.66
TRBV7-1A0A0A6YYK4 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC19.17■□□□□ 0.66
TRBV7-1A0A0A6YYK4 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
TRBV7-1A0A0A6YYK4 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TRBV7-1A0A0A6YYK4 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC19.17■□□□□ 0.66
TRBV7-1A0A0A6YYK4 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
TRBV7-1A0A0A6YYK4 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
TRBV7-1A0A0A6YYK4 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC19.17■□□□□ 0.66
TRBV7-1A0A0A6YYK4 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TRBV7-1A0A0A6YYK4 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TRBV7-1A0A0A6YYK4 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TRBV7-1A0A0A6YYK4 PKM-203ENST00000389093 2279 ntTSL 5 BASIC19.16■□□□□ 0.66
TRBV7-1A0A0A6YYK4 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TRBV7-1A0A0A6YYK4 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
TRBV7-1A0A0A6YYK4 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TRBV7-1A0A0A6YYK4 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC19.15■□□□□ 0.66
TRBV7-1A0A0A6YYK4 AL359258.2-201ENST00000564063 1566 ntBASIC19.15■□□□□ 0.66
TRBV7-1A0A0A6YYK4 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TRBV7-1A0A0A6YYK4 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
TRBV7-1A0A0A6YYK4 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC19.15■□□□□ 0.66
TRBV7-1A0A0A6YYK4 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
TRBV7-1A0A0A6YYK4 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
TRBV7-1A0A0A6YYK4 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
TRBV7-1A0A0A6YYK4 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
TRBV7-1A0A0A6YYK4 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
TRBV7-1A0A0A6YYK4 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
TRBV7-1A0A0A6YYK4 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC19.13■□□□□ 0.65
TRBV7-1A0A0A6YYK4 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TRBV7-1A0A0A6YYK4 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
TRBV7-1A0A0A6YYK4 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
TRBV7-1A0A0A6YYK4 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
TRBV7-1A0A0A6YYK4 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC19.13■□□□□ 0.65
TRBV7-1A0A0A6YYK4 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
TRBV7-1A0A0A6YYK4 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
TRBV7-1A0A0A6YYK4 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
TRBV7-1A0A0A6YYK4 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
TRBV7-1A0A0A6YYK4 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
TRBV7-1A0A0A6YYK4 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC19.13■□□□□ 0.65
TRBV7-1A0A0A6YYK4 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TRBV7-1A0A0A6YYK4 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TRBV7-1A0A0A6YYK4 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TRBV7-1A0A0A6YYK4 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TRBV7-1A0A0A6YYK4 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
TRBV7-1A0A0A6YYK4 CREM-210ENST00000374721 2020 ntTSL 5 BASIC19.12■□□□□ 0.65
TRBV7-1A0A0A6YYK4 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
TRBV7-1A0A0A6YYK4 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
TRBV7-1A0A0A6YYK4 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TRBV7-1A0A0A6YYK4 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TRBV7-1A0A0A6YYK4 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
TRBV7-1A0A0A6YYK4 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
TRBV7-1A0A0A6YYK4 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TRBV7-1A0A0A6YYK4 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC19.11■□□□□ 0.65
TRBV7-1A0A0A6YYK4 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
TRBV7-1A0A0A6YYK4 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TRBV7-1A0A0A6YYK4 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
TRBV7-1A0A0A6YYK4 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
TRBV7-1A0A0A6YYK4 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
TRBV7-1A0A0A6YYK4 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC19.1■□□□□ 0.65
TRBV7-1A0A0A6YYK4 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC19.1■□□□□ 0.65
TRBV7-1A0A0A6YYK4 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC19.09■□□□□ 0.65
TRBV7-1A0A0A6YYK4 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
TRBV7-1A0A0A6YYK4 RPS2-202ENST00000526522 924 ntTSL 2 BASIC19.09■□□□□ 0.65
TRBV7-1A0A0A6YYK4 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC19.09■□□□□ 0.65
TRBV7-1A0A0A6YYK4 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
TRBV7-1A0A0A6YYK4 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC19.08■□□□□ 0.64
TRBV7-1A0A0A6YYK4 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC19.07■□□□□ 0.64
TRBV7-1A0A0A6YYK4 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 19 ms