Protein–RNA interactions for Protein: A0A075B6H8

IGKV1D-42, Immunoglobulin kappa variable 1D-42 (non-functional) (Fragment), humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGKV1D-42A0A075B6H8 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
IGKV1D-42A0A075B6H8 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC22.41■■□□□ 1.18
IGKV1D-42A0A075B6H8 MACF1-219ENST00000484793 834 ntTSL 2 BASIC22.41■■□□□ 1.18
IGKV1D-42A0A075B6H8 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC22.41■■□□□ 1.18
IGKV1D-42A0A075B6H8 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC22.41■■□□□ 1.18
IGKV1D-42A0A075B6H8 MIR3648-2-201ENST00000581792 180 ntBASIC22.41■■□□□ 1.18
IGKV1D-42A0A075B6H8 MIR3648-1-201ENST00000615959 180 ntBASIC22.41■■□□□ 1.18
IGKV1D-42A0A075B6H8 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC22.41■■□□□ 1.18
IGKV1D-42A0A075B6H8 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
IGKV1D-42A0A075B6H8 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC22.41■■□□□ 1.18
IGKV1D-42A0A075B6H8 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
IGKV1D-42A0A075B6H8 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
IGKV1D-42A0A075B6H8 AC142472.1-201ENST00000612013 1741 ntBASIC22.4■■□□□ 1.18
IGKV1D-42A0A075B6H8 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC22.4■■□□□ 1.18
IGKV1D-42A0A075B6H8 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC22.4■■□□□ 1.18
IGKV1D-42A0A075B6H8 CHST11-203ENST00000547956 936 ntTSL 2 BASIC22.4■■□□□ 1.18
IGKV1D-42A0A075B6H8 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
IGKV1D-42A0A075B6H8 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
IGKV1D-42A0A075B6H8 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC22.39■■□□□ 1.18
IGKV1D-42A0A075B6H8 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC22.39■■□□□ 1.17
IGKV1D-42A0A075B6H8 GDI1-215ENST00000630693 786 ntTSL 4 BASIC22.39■■□□□ 1.17
IGKV1D-42A0A075B6H8 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC22.39■■□□□ 1.17
IGKV1D-42A0A075B6H8 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC22.39■■□□□ 1.17
IGKV1D-42A0A075B6H8 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
IGKV1D-42A0A075B6H8 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
IGKV1D-42A0A075B6H8 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC22.38■■□□□ 1.17
IGKV1D-42A0A075B6H8 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
IGKV1D-42A0A075B6H8 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC22.38■■□□□ 1.17
IGKV1D-42A0A075B6H8 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC22.38■■□□□ 1.17
IGKV1D-42A0A075B6H8 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
IGKV1D-42A0A075B6H8 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
IGKV1D-42A0A075B6H8 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC22.37■■□□□ 1.17
IGKV1D-42A0A075B6H8 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC22.37■■□□□ 1.17
IGKV1D-42A0A075B6H8 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC22.37■■□□□ 1.17
IGKV1D-42A0A075B6H8 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC22.36■■□□□ 1.17
IGKV1D-42A0A075B6H8 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
IGKV1D-42A0A075B6H8 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC22.35■■□□□ 1.17
IGKV1D-42A0A075B6H8 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
IGKV1D-42A0A075B6H8 AC091060.1-201ENST00000623524 1766 ntBASIC22.35■■□□□ 1.17
IGKV1D-42A0A075B6H8 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
IGKV1D-42A0A075B6H8 SHF-207ENST00000560540 2062 ntTSL 5 BASIC22.34■■□□□ 1.17
IGKV1D-42A0A075B6H8 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
IGKV1D-42A0A075B6H8 AC016575.1-201ENST00000607026 382 ntBASIC22.34■■□□□ 1.17
IGKV1D-42A0A075B6H8 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC22.34■■□□□ 1.17
IGKV1D-42A0A075B6H8 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC22.33■■□□□ 1.17
IGKV1D-42A0A075B6H8 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
IGKV1D-42A0A075B6H8 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC22.33■■□□□ 1.17
IGKV1D-42A0A075B6H8 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
IGKV1D-42A0A075B6H8 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC22.33■■□□□ 1.17
IGKV1D-42A0A075B6H8 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC22.33■■□□□ 1.16
IGKV1D-42A0A075B6H8 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
IGKV1D-42A0A075B6H8 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC22.32■■□□□ 1.16
IGKV1D-42A0A075B6H8 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
IGKV1D-42A0A075B6H8 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC22.32■■□□□ 1.16
IGKV1D-42A0A075B6H8 MIR7108-201ENST00000614319 87 ntBASIC22.32■■□□□ 1.16
IGKV1D-42A0A075B6H8 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
IGKV1D-42A0A075B6H8 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC22.31■■□□□ 1.16
IGKV1D-42A0A075B6H8 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
IGKV1D-42A0A075B6H8 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC22.31■■□□□ 1.16
IGKV1D-42A0A075B6H8 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC22.31■■□□□ 1.16
IGKV1D-42A0A075B6H8 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
IGKV1D-42A0A075B6H8 METRNL-202ENST00000570778 967 ntTSL 5 BASIC22.3■■□□□ 1.16
IGKV1D-42A0A075B6H8 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC22.3■■□□□ 1.16
IGKV1D-42A0A075B6H8 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
IGKV1D-42A0A075B6H8 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
IGKV1D-42A0A075B6H8 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC22.3■■□□□ 1.16
IGKV1D-42A0A075B6H8 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC22.29■■□□□ 1.16
IGKV1D-42A0A075B6H8 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
IGKV1D-42A0A075B6H8 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
IGKV1D-42A0A075B6H8 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC22.29■■□□□ 1.16
IGKV1D-42A0A075B6H8 MED25-210ENST00000612854 801 ntTSL 5 BASIC22.29■■□□□ 1.16
IGKV1D-42A0A075B6H8 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
IGKV1D-42A0A075B6H8 MED25-214ENST00000622402 642 ntTSL 5 BASIC22.29■■□□□ 1.16
IGKV1D-42A0A075B6H8 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
IGKV1D-42A0A075B6H8 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
IGKV1D-42A0A075B6H8 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC22.28■■□□□ 1.16
IGKV1D-42A0A075B6H8 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC22.28■■□□□ 1.16
IGKV1D-42A0A075B6H8 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
IGKV1D-42A0A075B6H8 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
IGKV1D-42A0A075B6H8 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC22.28■■□□□ 1.16
IGKV1D-42A0A075B6H8 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
IGKV1D-42A0A075B6H8 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
IGKV1D-42A0A075B6H8 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC22.28■■□□□ 1.16
IGKV1D-42A0A075B6H8 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
IGKV1D-42A0A075B6H8 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
IGKV1D-42A0A075B6H8 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
IGKV1D-42A0A075B6H8 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.15
IGKV1D-42A0A075B6H8 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC22.26■■□□□ 1.15
IGKV1D-42A0A075B6H8 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC22.26■■□□□ 1.15
IGKV1D-42A0A075B6H8 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
IGKV1D-42A0A075B6H8 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC22.25■■□□□ 1.15
IGKV1D-42A0A075B6H8 AL359258.2-201ENST00000564063 1566 ntBASIC22.25■■□□□ 1.15
IGKV1D-42A0A075B6H8 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC22.25■■□□□ 1.15
IGKV1D-42A0A075B6H8 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC22.25■■□□□ 1.15
IGKV1D-42A0A075B6H8 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC22.25■■□□□ 1.15
IGKV1D-42A0A075B6H8 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
IGKV1D-42A0A075B6H8 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
IGKV1D-42A0A075B6H8 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
IGKV1D-42A0A075B6H8 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
IGKV1D-42A0A075B6H8 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Retrieved 100 of 98,524 protein–RNA pairs in 42.2 ms