Protein–RNA interactions for Protein: Q9XRX5

HHLA3, HERV-H LTR-associating protein 3, humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HHLA3Q9XRX5 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
HHLA3Q9XRX5 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC13.3□□□□□ -0.28
HHLA3Q9XRX5 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC13.3□□□□□ -0.28
HHLA3Q9XRX5 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC13.3□□□□□ -0.28
HHLA3Q9XRX5 MIR4497-201ENST00000583208 89 ntBASIC13.3□□□□□ -0.28
HHLA3Q9XRX5 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC13.3□□□□□ -0.28
HHLA3Q9XRX5 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
HHLA3Q9XRX5 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
HHLA3Q9XRX5 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
HHLA3Q9XRX5 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
HHLA3Q9XRX5 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
HHLA3Q9XRX5 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC13.3□□□□□ -0.28
HHLA3Q9XRX5 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC13.3□□□□□ -0.28
HHLA3Q9XRX5 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
HHLA3Q9XRX5 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
HHLA3Q9XRX5 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
HHLA3Q9XRX5 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
HHLA3Q9XRX5 NKILA-202ENST00000614771 2598 ntBASIC13.29□□□□□ -0.28
HHLA3Q9XRX5 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
HHLA3Q9XRX5 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC13.29□□□□□ -0.28
HHLA3Q9XRX5 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC13.29□□□□□ -0.28
HHLA3Q9XRX5 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
HHLA3Q9XRX5 AC011676.5-201ENST00000624864 2660 ntBASIC13.29□□□□□ -0.28
HHLA3Q9XRX5 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
HHLA3Q9XRX5 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
HHLA3Q9XRX5 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
HHLA3Q9XRX5 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC13.29□□□□□ -0.28
HHLA3Q9XRX5 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC13.29□□□□□ -0.28
HHLA3Q9XRX5 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC13.29□□□□□ -0.28
HHLA3Q9XRX5 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
HHLA3Q9XRX5 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
HHLA3Q9XRX5 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC13.29□□□□□ -0.28
HHLA3Q9XRX5 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
HHLA3Q9XRX5 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC13.29□□□□□ -0.28
HHLA3Q9XRX5 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
HHLA3Q9XRX5 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
HHLA3Q9XRX5 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
HHLA3Q9XRX5 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
HHLA3Q9XRX5 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC13.29□□□□□ -0.28
HHLA3Q9XRX5 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC13.29□□□□□ -0.28
HHLA3Q9XRX5 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC13.29□□□□□ -0.28
HHLA3Q9XRX5 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
HHLA3Q9XRX5 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC13.29□□□□□ -0.28
HHLA3Q9XRX5 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC13.29□□□□□ -0.28
HHLA3Q9XRX5 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
HHLA3Q9XRX5 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC13.29□□□□□ -0.28
HHLA3Q9XRX5 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC13.29□□□□□ -0.28
HHLA3Q9XRX5 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
HHLA3Q9XRX5 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
HHLA3Q9XRX5 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
HHLA3Q9XRX5 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC13.29□□□□□ -0.28
HHLA3Q9XRX5 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
HHLA3Q9XRX5 AL118508.1-201ENST00000613502 2345 ntBASIC13.29□□□□□ -0.28
HHLA3Q9XRX5 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC13.29□□□□□ -0.28
HHLA3Q9XRX5 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC13.29□□□□□ -0.28
HHLA3Q9XRX5 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
HHLA3Q9XRX5 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
HHLA3Q9XRX5 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
HHLA3Q9XRX5 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
HHLA3Q9XRX5 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
HHLA3Q9XRX5 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
HHLA3Q9XRX5 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
HHLA3Q9XRX5 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
HHLA3Q9XRX5 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
HHLA3Q9XRX5 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
HHLA3Q9XRX5 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC13.28□□□□□ -0.28
HHLA3Q9XRX5 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
HHLA3Q9XRX5 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC13.28□□□□□ -0.28
HHLA3Q9XRX5 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
HHLA3Q9XRX5 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
HHLA3Q9XRX5 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
HHLA3Q9XRX5 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
HHLA3Q9XRX5 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
HHLA3Q9XRX5 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC13.28□□□□□ -0.28
HHLA3Q9XRX5 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
HHLA3Q9XRX5 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
HHLA3Q9XRX5 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC13.28□□□□□ -0.28
HHLA3Q9XRX5 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
HHLA3Q9XRX5 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC13.28□□□□□ -0.28
HHLA3Q9XRX5 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
HHLA3Q9XRX5 AC022211.2-201ENST00000585075 2527 ntBASIC13.28□□□□□ -0.28
HHLA3Q9XRX5 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC13.28□□□□□ -0.28
HHLA3Q9XRX5 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
HHLA3Q9XRX5 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC13.28□□□□□ -0.28
HHLA3Q9XRX5 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
HHLA3Q9XRX5 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC13.28□□□□□ -0.28
HHLA3Q9XRX5 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
HHLA3Q9XRX5 RBM17P1-201ENST00000453646 1190 ntBASIC13.28□□□□□ -0.28
HHLA3Q9XRX5 CA15P1-201ENST00000481698 905 ntBASIC13.28□□□□□ -0.28
HHLA3Q9XRX5 FDX2-206ENST00000492239 773 ntTSL 2 BASIC13.28□□□□□ -0.28
HHLA3Q9XRX5 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC13.28□□□□□ -0.28
HHLA3Q9XRX5 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC13.28□□□□□ -0.28
HHLA3Q9XRX5 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
HHLA3Q9XRX5 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC13.28□□□□□ -0.28
HHLA3Q9XRX5 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
HHLA3Q9XRX5 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
HHLA3Q9XRX5 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
HHLA3Q9XRX5 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
HHLA3Q9XRX5 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
HHLA3Q9XRX5 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms