Protein–RNA interactions for Protein: Q9ULB4

CDH9, Cadherin-9, humanhuman

Predictions only

Length 789 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH9Q9ULB4 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CDH9Q9ULB4 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC19.1■□□□□ 0.65
CDH9Q9ULB4 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
CDH9Q9ULB4 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC19.1■□□□□ 0.65
CDH9Q9ULB4 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CDH9Q9ULB4 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC19.1■□□□□ 0.65
CDH9Q9ULB4 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CDH9Q9ULB4 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CDH9Q9ULB4 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CDH9Q9ULB4 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
CDH9Q9ULB4 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CDH9Q9ULB4 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
CDH9Q9ULB4 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CDH9Q9ULB4 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CDH9Q9ULB4 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CDH9Q9ULB4 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CDH9Q9ULB4 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CDH9Q9ULB4 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC19.09■□□□□ 0.65
CDH9Q9ULB4 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
CDH9Q9ULB4 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
CDH9Q9ULB4 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CDH9Q9ULB4 AC022898.2-201ENST00000616822 1312 ntBASIC19.09■□□□□ 0.65
CDH9Q9ULB4 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CDH9Q9ULB4 POM121L3P-201ENST00000419331 1163 ntBASIC19.09■□□□□ 0.65
CDH9Q9ULB4 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC19.09■□□□□ 0.65
CDH9Q9ULB4 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC19.09■□□□□ 0.65
CDH9Q9ULB4 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC19.09■□□□□ 0.65
CDH9Q9ULB4 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC19.09■□□□□ 0.65
CDH9Q9ULB4 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CDH9Q9ULB4 TBCB-205ENST00000585746 875 ntTSL 3 BASIC19.09■□□□□ 0.65
CDH9Q9ULB4 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CDH9Q9ULB4 AC138894.3-201ENST00000603787 634 ntBASIC19.09■□□□□ 0.65
CDH9Q9ULB4 CCNC-219ENST00000627680 896 ntTSL 5 BASIC19.09■□□□□ 0.65
CDH9Q9ULB4 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC19.09■□□□□ 0.65
CDH9Q9ULB4 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CDH9Q9ULB4 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC19.09■□□□□ 0.65
CDH9Q9ULB4 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CDH9Q9ULB4 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CDH9Q9ULB4 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CDH9Q9ULB4 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC19.09■□□□□ 0.65
CDH9Q9ULB4 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.65
CDH9Q9ULB4 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
CDH9Q9ULB4 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC19.08■□□□□ 0.65
CDH9Q9ULB4 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC19.08■□□□□ 0.65
CDH9Q9ULB4 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.65
CDH9Q9ULB4 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.65
CDH9Q9ULB4 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
CDH9Q9ULB4 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC19.08■□□□□ 0.65
CDH9Q9ULB4 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
CDH9Q9ULB4 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
CDH9Q9ULB4 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
CDH9Q9ULB4 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
CDH9Q9ULB4 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
CDH9Q9ULB4 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
CDH9Q9ULB4 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.65
CDH9Q9ULB4 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
CDH9Q9ULB4 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC19.08■□□□□ 0.65
CDH9Q9ULB4 CCS-201ENST00000310190 942 ntTSL 5 BASIC19.08■□□□□ 0.64
CDH9Q9ULB4 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CDH9Q9ULB4 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CDH9Q9ULB4 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
CDH9Q9ULB4 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CDH9Q9ULB4 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
CDH9Q9ULB4 FICD-205ENST00000552758 603 ntTSL 2 BASIC19.08■□□□□ 0.64
CDH9Q9ULB4 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC19.08■□□□□ 0.64
CDH9Q9ULB4 AC091304.2-201ENST00000564639 760 ntBASIC19.08■□□□□ 0.64
CDH9Q9ULB4 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC19.08■□□□□ 0.64
CDH9Q9ULB4 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC19.08■□□□□ 0.64
CDH9Q9ULB4 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC19.08■□□□□ 0.64
CDH9Q9ULB4 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC19.08■□□□□ 0.64
CDH9Q9ULB4 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CDH9Q9ULB4 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CDH9Q9ULB4 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CDH9Q9ULB4 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC19.08■□□□□ 0.64
CDH9Q9ULB4 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC19.08■□□□□ 0.64
CDH9Q9ULB4 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC19.08■□□□□ 0.64
CDH9Q9ULB4 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.64
CDH9Q9ULB4 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC19.08■□□□□ 0.64
CDH9Q9ULB4 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
CDH9Q9ULB4 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
CDH9Q9ULB4 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC19.08■□□□□ 0.64
CDH9Q9ULB4 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
CDH9Q9ULB4 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
CDH9Q9ULB4 FLYWCH1P1-201ENST00000460917 1874 ntBASIC19.07■□□□□ 0.64
CDH9Q9ULB4 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CDH9Q9ULB4 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CDH9Q9ULB4 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CDH9Q9ULB4 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC19.07■□□□□ 0.64
CDH9Q9ULB4 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CDH9Q9ULB4 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CDH9Q9ULB4 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CDH9Q9ULB4 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CDH9Q9ULB4 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
CDH9Q9ULB4 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CDH9Q9ULB4 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC19.07■□□□□ 0.64
CDH9Q9ULB4 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CDH9Q9ULB4 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
CDH9Q9ULB4 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC19.07■□□□□ 0.64
CDH9Q9ULB4 KRT18P31-201ENST00000506277 1292 ntBASIC19.07■□□□□ 0.64
CDH9Q9ULB4 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC19.07■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms