Protein–RNA interactions for Protein: Q9NRR8

CDC42SE1, CDC42 small effector protein 1, humanhuman

Predictions only

Length 79 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1Q9NRR8 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
CDC42SE1Q9NRR8 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC9.27□□□□□ -0.93
CDC42SE1Q9NRR8 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
CDC42SE1Q9NRR8 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
CDC42SE1Q9NRR8 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
CDC42SE1Q9NRR8 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC9.27□□□□□ -0.93
CDC42SE1Q9NRR8 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC9.27□□□□□ -0.93
CDC42SE1Q9NRR8 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC9.27□□□□□ -0.93
CDC42SE1Q9NRR8 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
CDC42SE1Q9NRR8 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
CDC42SE1Q9NRR8 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
CDC42SE1Q9NRR8 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC9.26□□□□□ -0.93
CDC42SE1Q9NRR8 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC9.26□□□□□ -0.93
CDC42SE1Q9NRR8 RNF8-202ENST00000373479 5631 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
CDC42SE1Q9NRR8 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
CDC42SE1Q9NRR8 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC9.26□□□□□ -0.93
CDC42SE1Q9NRR8 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC9.26□□□□□ -0.93
CDC42SE1Q9NRR8 TEX21P-204ENST00000641479 1693 ntBASIC9.26□□□□□ -0.93
CDC42SE1Q9NRR8 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC9.26□□□□□ -0.93
CDC42SE1Q9NRR8 RCAN3-207ENST00000538532 2640 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
CDC42SE1Q9NRR8 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
CDC42SE1Q9NRR8 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC9.26□□□□□ -0.93
CDC42SE1Q9NRR8 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC9.26□□□□□ -0.93
CDC42SE1Q9NRR8 CPXM2-201ENST00000241305 3554 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
CDC42SE1Q9NRR8 SLC4A5-201ENST00000346834 6233 ntAPPRIS P4 TSL 5 BASIC9.26□□□□□ -0.93
CDC42SE1Q9NRR8 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
CDC42SE1Q9NRR8 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC9.26□□□□□ -0.93
CDC42SE1Q9NRR8 VILL-207ENST00000465644 1857 ntTSL 5 BASIC9.26□□□□□ -0.93
CDC42SE1Q9NRR8 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
CDC42SE1Q9NRR8 TPCN1-214ENST00000550785 5345 ntTSL 2 BASIC9.26□□□□□ -0.93
CDC42SE1Q9NRR8 CICP20-201ENST00000443330 2801 ntBASIC9.26□□□□□ -0.93
CDC42SE1Q9NRR8 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
CDC42SE1Q9NRR8 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
CDC42SE1Q9NRR8 NTRK3-AS1-201ENST00000569588 2663 ntTSL 2 BASIC9.26□□□□□ -0.93
CDC42SE1Q9NRR8 DUSP28-202ENST00000405954 3461 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
CDC42SE1Q9NRR8 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
CDC42SE1Q9NRR8 AC005089.1-201ENST00000619486 2241 ntBASIC9.26□□□□□ -0.93
CDC42SE1Q9NRR8 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
CDC42SE1Q9NRR8 CDV3-203ENST00000431519 955 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
CDC42SE1Q9NRR8 HLA-V-202ENST00000446817 847 ntBASIC9.26□□□□□ -0.93
CDC42SE1Q9NRR8 AP001107.7-201ENST00000533287 272 ntTSL 2 BASIC9.26□□□□□ -0.93
CDC42SE1Q9NRR8 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC9.26□□□□□ -0.93
CDC42SE1Q9NRR8 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC9.26□□□□□ -0.93
CDC42SE1Q9NRR8 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC9.26□□□□□ -0.93
CDC42SE1Q9NRR8 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC9.26□□□□□ -0.93
CDC42SE1Q9NRR8 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
CDC42SE1Q9NRR8 ADAM15-209ENST00000449910 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC9.26□□□□□ -0.93
CDC42SE1Q9NRR8 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
CDC42SE1Q9NRR8 AC139749.1-202ENST00000617529 3139 ntBASIC9.26□□□□□ -0.93
CDC42SE1Q9NRR8 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
CDC42SE1Q9NRR8 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC9.26□□□□□ -0.93
CDC42SE1Q9NRR8 FBXO41-201ENST00000295133 6928 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
CDC42SE1Q9NRR8 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
CDC42SE1Q9NRR8 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC9.26□□□□□ -0.93
CDC42SE1Q9NRR8 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC9.26□□□□□ -0.93
CDC42SE1Q9NRR8 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
CDC42SE1Q9NRR8 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC9.26□□□□□ -0.93
CDC42SE1Q9NRR8 HSDL2-202ENST00000398805 3350 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
CDC42SE1Q9NRR8 AC092068.3-201ENST00000587894 2016 ntBASIC9.26□□□□□ -0.93
CDC42SE1Q9NRR8 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC9.26□□□□□ -0.93
CDC42SE1Q9NRR8 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
CDC42SE1Q9NRR8 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC9.26□□□□□ -0.93
CDC42SE1Q9NRR8 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC9.26□□□□□ -0.93
CDC42SE1Q9NRR8 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
CDC42SE1Q9NRR8 TSC2-203ENST00000382538 5264 ntAPPRIS ALT2 TSL 2 BASIC9.25□□□□□ -0.93
CDC42SE1Q9NRR8 ZBTB17-202ENST00000375743 2745 ntAPPRIS P3 TSL 1 (best) BASIC9.25□□□□□ -0.93
CDC42SE1Q9NRR8 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
CDC42SE1Q9NRR8 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
CDC42SE1Q9NRR8 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
CDC42SE1Q9NRR8 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
CDC42SE1Q9NRR8 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
CDC42SE1Q9NRR8 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC9.25□□□□□ -0.93
CDC42SE1Q9NRR8 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC9.25□□□□□ -0.93
CDC42SE1Q9NRR8 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC9.25□□□□□ -0.93
CDC42SE1Q9NRR8 CD6-201ENST00000313421 3252 ntAPPRIS P3 TSL 1 (best) BASIC9.25□□□□□ -0.93
CDC42SE1Q9NRR8 SPIDR-201ENST00000297423 3988 ntAPPRIS P3 TSL 1 (best) BASIC9.25□□□□□ -0.93
CDC42SE1Q9NRR8 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
CDC42SE1Q9NRR8 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC9.25□□□□□ -0.93
CDC42SE1Q9NRR8 BLK-201ENST00000259089 2606 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
CDC42SE1Q9NRR8 HNRNPU-226ENST00000640218 6858 ntAPPRIS ALT2 TSL 1 (best) BASIC9.25□□□□□ -0.93
CDC42SE1Q9NRR8 EGFR-206ENST00000454757 5464 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
CDC42SE1Q9NRR8 SEMA4F-210ENST00000611975 6007 ntTSL 5 BASIC9.25□□□□□ -0.93
CDC42SE1Q9NRR8 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
CDC42SE1Q9NRR8 SLC4A8-204ENST00000514353 3041 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
CDC42SE1Q9NRR8 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
CDC42SE1Q9NRR8 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC9.25□□□□□ -0.93
CDC42SE1Q9NRR8 FAM219A-201ENST00000297620 3588 ntAPPRIS P3 TSL 2 BASIC9.25□□□□□ -0.93
CDC42SE1Q9NRR8 ZNF783-202ENST00000434415 4452 ntAPPRIS P1 TSL 5 BASIC9.25□□□□□ -0.93
CDC42SE1Q9NRR8 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
CDC42SE1Q9NRR8 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC9.25□□□□□ -0.93
CDC42SE1Q9NRR8 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC9.25□□□□□ -0.93
CDC42SE1Q9NRR8 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
CDC42SE1Q9NRR8 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
CDC42SE1Q9NRR8 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
CDC42SE1Q9NRR8 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC9.25□□□□□ -0.93
CDC42SE1Q9NRR8 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
CDC42SE1Q9NRR8 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
CDC42SE1Q9NRR8 AC108673.1-201ENST00000510422 1159 ntBASIC9.25□□□□□ -0.93
CDC42SE1Q9NRR8 SSSCA1-AS1-201ENST00000567594 614 ntBASIC9.25□□□□□ -0.93
CDC42SE1Q9NRR8 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
Retrieved 100 of 98,524 protein–RNA pairs in 20.8 ms