Protein–RNA interactions for Protein: Q8TD26

CHD6, Chromodomain-helicase-DNA-binding protein 6, humanhuman

Predictions only

Length 2,715 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6Q8TD26 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
CHD6Q8TD26 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC16.19■□□□□ 0.18
CHD6Q8TD26 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
CHD6Q8TD26 INE1-201ENST00000456273 945 ntBASIC16.19■□□□□ 0.18
CHD6Q8TD26 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
CHD6Q8TD26 KRT8P48-201ENST00000515599 1220 ntBASIC16.19■□□□□ 0.18
CHD6Q8TD26 ERH-203ENST00000557016 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CHD6Q8TD26 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CHD6Q8TD26 NCF1C-201ENST00000438382 1427 ntBASIC16.19■□□□□ 0.18
CHD6Q8TD26 BID-203ENST00000399765 1879 ntTSL 2 BASIC16.19■□□□□ 0.18
CHD6Q8TD26 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CHD6Q8TD26 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CHD6Q8TD26 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC16.19■□□□□ 0.18
CHD6Q8TD26 NARF-204ENST00000390006 1766 ntTSL 2 BASIC16.19■□□□□ 0.18
CHD6Q8TD26 AC092919.2-201ENST00000623631 1645 ntBASIC16.19■□□□□ 0.18
CHD6Q8TD26 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC16.19■□□□□ 0.18
CHD6Q8TD26 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
CHD6Q8TD26 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
CHD6Q8TD26 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CHD6Q8TD26 SPDYE21P-201ENST00000413323 827 ntBASIC16.18■□□□□ 0.18
CHD6Q8TD26 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CHD6Q8TD26 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CHD6Q8TD26 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC16.18■□□□□ 0.18
CHD6Q8TD26 FANCA-204ENST00000534992 1088 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CHD6Q8TD26 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC16.18■□□□□ 0.18
CHD6Q8TD26 DPF3-210ENST00000556509 1138 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CHD6Q8TD26 CYB561-216ENST00000582297 897 ntTSL 3 BASIC16.18■□□□□ 0.18
CHD6Q8TD26 AC008667.4-201ENST00000607370 168 ntBASIC16.18■□□□□ 0.18
CHD6Q8TD26 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
CHD6Q8TD26 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CHD6Q8TD26 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CHD6Q8TD26 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC16.18■□□□□ 0.18
CHD6Q8TD26 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC16.18■□□□□ 0.18
CHD6Q8TD26 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CHD6Q8TD26 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC16.18■□□□□ 0.18
CHD6Q8TD26 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC16.18■□□□□ 0.18
CHD6Q8TD26 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC16.18■□□□□ 0.18
CHD6Q8TD26 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CHD6Q8TD26 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC16.18■□□□□ 0.18
CHD6Q8TD26 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
CHD6Q8TD26 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
CHD6Q8TD26 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CHD6Q8TD26 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CHD6Q8TD26 UBE2T-201ENST00000367274 922 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CHD6Q8TD26 AC004233.3-201ENST00000607794 1269 ntBASIC16.18■□□□□ 0.18
CHD6Q8TD26 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC16.18■□□□□ 0.18
CHD6Q8TD26 AL805961.1-202ENST00000641562 540 ntBASIC16.18■□□□□ 0.18
CHD6Q8TD26 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
CHD6Q8TD26 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CHD6Q8TD26 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CHD6Q8TD26 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CHD6Q8TD26 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CHD6Q8TD26 AC098614.1-201ENST00000368528 745 ntBASIC16.17■□□□□ 0.18
CHD6Q8TD26 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CHD6Q8TD26 PPP6R2P1-201ENST00000450880 1275 ntBASIC16.17■□□□□ 0.18
CHD6Q8TD26 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC16.17■□□□□ 0.18
CHD6Q8TD26 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CHD6Q8TD26 GUSBP2-202ENST00000479900 1203 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CHD6Q8TD26 CDK4-206ENST00000549606 558 ntTSL 2 BASIC16.17■□□□□ 0.18
CHD6Q8TD26 PSENEN-203ENST00000591949 833 ntTSL 2 BASIC16.17■□□□□ 0.18
CHD6Q8TD26 LINC01278-203ENST00000608788 820 ntTSL 5 BASIC16.17■□□□□ 0.18
CHD6Q8TD26 LINC01278-207ENST00000610234 555 ntTSL 4 BASIC16.17■□□□□ 0.18
CHD6Q8TD26 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC16.17■□□□□ 0.18
CHD6Q8TD26 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
CHD6Q8TD26 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CHD6Q8TD26 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
CHD6Q8TD26 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CHD6Q8TD26 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC16.17■□□□□ 0.18
CHD6Q8TD26 AC022144.1-201ENST00000602255 1580 ntBASIC16.17■□□□□ 0.18
CHD6Q8TD26 AC120498.3-201ENST00000568884 542 ntTSL 4 BASIC16.17■□□□□ 0.18
CHD6Q8TD26 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC16.17■□□□□ 0.18
CHD6Q8TD26 RAB34-224ENST00000636513 888 ntTSL 5 BASIC16.17■□□□□ 0.18
CHD6Q8TD26 AL109936.8-201ENST00000641772 604 ntBASIC16.17■□□□□ 0.18
CHD6Q8TD26 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC16.17■□□□□ 0.18
CHD6Q8TD26 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC16.16■□□□□ 0.18
CHD6Q8TD26 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CHD6Q8TD26 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC16.16■□□□□ 0.18
CHD6Q8TD26 FXNP2-201ENST00000411625 547 ntBASIC16.16■□□□□ 0.18
CHD6Q8TD26 TSSK5P-201ENST00000423978 907 ntBASIC16.16■□□□□ 0.18
CHD6Q8TD26 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC16.16■□□□□ 0.18
CHD6Q8TD26 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
CHD6Q8TD26 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
CHD6Q8TD26 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC16.16■□□□□ 0.18
CHD6Q8TD26 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CHD6Q8TD26 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC16.16■□□□□ 0.18
CHD6Q8TD26 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CHD6Q8TD26 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC16.16■□□□□ 0.18
CHD6Q8TD26 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CHD6Q8TD26 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC16.16■□□□□ 0.18
CHD6Q8TD26 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC16.16■□□□□ 0.18
CHD6Q8TD26 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC16.16■□□□□ 0.18
CHD6Q8TD26 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CHD6Q8TD26 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CHD6Q8TD26 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CHD6Q8TD26 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC16.16■□□□□ 0.18
CHD6Q8TD26 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CHD6Q8TD26 AC022210.1-201ENST00000449856 793 ntBASIC16.16■□□□□ 0.18
CHD6Q8TD26 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC16.16■□□□□ 0.18
CHD6Q8TD26 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CHD6Q8TD26 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC16.16■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms