Protein–RNA interactions for Protein: P35523

CLCN1, Chloride channel protein 1, humanhuman

Predictions only

Length 988 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1P35523 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CLCN1P35523 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CLCN1P35523 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CLCN1P35523 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
CLCN1P35523 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC20.65■□□□□ 0.9
CLCN1P35523 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
CLCN1P35523 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
CLCN1P35523 REXO1L9P-201ENST00000604264 2108 ntBASIC20.65■□□□□ 0.9
CLCN1P35523 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CLCN1P35523 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC20.65■□□□□ 0.9
CLCN1P35523 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CLCN1P35523 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CLCN1P35523 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
CLCN1P35523 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CLCN1P35523 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
CLCN1P35523 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC20.65■□□□□ 0.9
CLCN1P35523 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
CLCN1P35523 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC20.65■□□□□ 0.9
CLCN1P35523 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC20.65■□□□□ 0.9
CLCN1P35523 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
CLCN1P35523 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
CLCN1P35523 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
CLCN1P35523 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CLCN1P35523 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CLCN1P35523 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CLCN1P35523 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
CLCN1P35523 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC20.65■□□□□ 0.9
CLCN1P35523 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC20.65■□□□□ 0.9
CLCN1P35523 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CLCN1P35523 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.9
CLCN1P35523 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
CLCN1P35523 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
CLCN1P35523 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
CLCN1P35523 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
CLCN1P35523 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC20.64■□□□□ 0.9
CLCN1P35523 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC20.64■□□□□ 0.9
CLCN1P35523 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
CLCN1P35523 FLJ13224-201ENST00000313737 1514 ntBASIC20.64■□□□□ 0.9
CLCN1P35523 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
CLCN1P35523 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
CLCN1P35523 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC20.64■□□□□ 0.89
CLCN1P35523 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC20.64■□□□□ 0.89
CLCN1P35523 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC20.64■□□□□ 0.89
CLCN1P35523 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC20.64■□□□□ 0.89
CLCN1P35523 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
CLCN1P35523 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
CLCN1P35523 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC20.64■□□□□ 0.89
CLCN1P35523 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CLCN1P35523 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
CLCN1P35523 KRASP1-201ENST00000407852 552 ntBASIC20.64■□□□□ 0.89
CLCN1P35523 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC20.64■□□□□ 0.89
CLCN1P35523 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC20.64■□□□□ 0.89
CLCN1P35523 C1QL1P1-201ENST00000568105 661 ntBASIC20.64■□□□□ 0.89
CLCN1P35523 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC20.64■□□□□ 0.89
CLCN1P35523 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
CLCN1P35523 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
CLCN1P35523 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CLCN1P35523 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
CLCN1P35523 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
CLCN1P35523 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
CLCN1P35523 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CLCN1P35523 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
CLCN1P35523 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CLCN1P35523 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC20.64■□□□□ 0.89
CLCN1P35523 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CLCN1P35523 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CLCN1P35523 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
CLCN1P35523 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC20.63■□□□□ 0.89
CLCN1P35523 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CLCN1P35523 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC20.63■□□□□ 0.89
CLCN1P35523 POR-209ENST00000439269 1858 ntTSL 2 BASIC20.63■□□□□ 0.89
CLCN1P35523 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
CLCN1P35523 POU5F1P3-201ENST00000428824 1078 ntBASIC20.63■□□□□ 0.89
CLCN1P35523 AC128676.1-201ENST00000454392 318 ntBASIC20.63■□□□□ 0.89
CLCN1P35523 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
CLCN1P35523 AC133681.1-201ENST00000465482 601 ntBASIC20.63■□□□□ 0.89
CLCN1P35523 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC20.63■□□□□ 0.89
CLCN1P35523 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
CLCN1P35523 AC124016.1-201ENST00000609552 612 ntBASIC20.63■□□□□ 0.89
CLCN1P35523 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC20.63■□□□□ 0.89
CLCN1P35523 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
CLCN1P35523 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CLCN1P35523 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
CLCN1P35523 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC20.63■□□□□ 0.89
CLCN1P35523 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC20.63■□□□□ 0.89
CLCN1P35523 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC20.63■□□□□ 0.89
CLCN1P35523 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
CLCN1P35523 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC20.63■□□□□ 0.89
CLCN1P35523 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CLCN1P35523 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CLCN1P35523 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CLCN1P35523 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC20.63■□□□□ 0.89
CLCN1P35523 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CLCN1P35523 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CLCN1P35523 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
CLCN1P35523 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC20.62■□□□□ 0.89
CLCN1P35523 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CLCN1P35523 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CLCN1P35523 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
CLCN1P35523 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms