Protein–RNA interactions for Protein: P21912

SDHB, Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial, humanhuman

Predictions only

Length 280 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDHBP21912 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SDHBP21912 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
SDHBP21912 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC17.72■□□□□ 0.43
SDHBP21912 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
SDHBP21912 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
SDHBP21912 FUOM-202ENST00000368551 628 ntTSL 3 BASIC17.72■□□□□ 0.43
SDHBP21912 METTL26-204ENST00000397665 558 ntTSL 2 BASIC17.72■□□□□ 0.43
SDHBP21912 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
SDHBP21912 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC17.72■□□□□ 0.43
SDHBP21912 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
SDHBP21912 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
SDHBP21912 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC17.72■□□□□ 0.43
SDHBP21912 AC011467.2-201ENST00000598425 242 ntBASIC17.72■□□□□ 0.43
SDHBP21912 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC17.72■□□□□ 0.43
SDHBP21912 MTDHP4-201ENST00000600287 670 ntBASIC17.72■□□□□ 0.43
SDHBP21912 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC17.72■□□□□ 0.43
SDHBP21912 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC17.72■□□□□ 0.43
SDHBP21912 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SDHBP21912 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC17.72■□□□□ 0.43
SDHBP21912 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC17.72■□□□□ 0.43
SDHBP21912 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC17.72■□□□□ 0.43
SDHBP21912 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SDHBP21912 GOLGA6L5P-202ENST00000515341 1828 ntBASIC17.72■□□□□ 0.43
SDHBP21912 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC17.72■□□□□ 0.43
SDHBP21912 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC17.72■□□□□ 0.43
SDHBP21912 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SDHBP21912 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
SDHBP21912 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
SDHBP21912 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC17.72■□□□□ 0.43
SDHBP21912 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
SDHBP21912 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
SDHBP21912 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SDHBP21912 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC17.71■□□□□ 0.43
SDHBP21912 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
SDHBP21912 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.43
SDHBP21912 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
SDHBP21912 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
SDHBP21912 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SDHBP21912 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
SDHBP21912 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC17.71■□□□□ 0.43
SDHBP21912 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SDHBP21912 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC17.71■□□□□ 0.43
SDHBP21912 CD99-202ENST00000381180 530 ntTSL 2 BASIC17.71■□□□□ 0.43
SDHBP21912 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
SDHBP21912 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC17.71■□□□□ 0.43
SDHBP21912 STMN4-207ENST00000523048 1224 ntTSL 2 BASIC17.71■□□□□ 0.43
SDHBP21912 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC17.71■□□□□ 0.43
SDHBP21912 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
SDHBP21912 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
SDHBP21912 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SDHBP21912 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
SDHBP21912 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
SDHBP21912 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
SDHBP21912 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC17.71■□□□□ 0.43
SDHBP21912 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
SDHBP21912 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
SDHBP21912 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
SDHBP21912 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
SDHBP21912 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
SDHBP21912 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
SDHBP21912 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC17.7■□□□□ 0.42
SDHBP21912 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
SDHBP21912 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SDHBP21912 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SDHBP21912 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC17.7■□□□□ 0.42
SDHBP21912 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SDHBP21912 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC17.7■□□□□ 0.42
SDHBP21912 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
SDHBP21912 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
SDHBP21912 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SDHBP21912 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SDHBP21912 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
SDHBP21912 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
SDHBP21912 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC17.7■□□□□ 0.42
SDHBP21912 CENPM-204ENST00000402420 688 ntTSL 5 BASIC17.7■□□□□ 0.42
SDHBP21912 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC17.7■□□□□ 0.42
SDHBP21912 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC17.7■□□□□ 0.42
SDHBP21912 SRP19-202ENST00000445150 833 ntTSL 2 BASIC17.7■□□□□ 0.42
SDHBP21912 RBM7-207ENST00000544582 692 ntTSL 3 BASIC17.7■□□□□ 0.42
SDHBP21912 CHRNA5-203ENST00000559554 1051 ntTSL 3 BASIC17.7■□□□□ 0.42
SDHBP21912 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
SDHBP21912 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
SDHBP21912 CYP51A1P1-201ENST00000492267 1507 ntBASIC17.7■□□□□ 0.42
SDHBP21912 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SDHBP21912 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC17.7■□□□□ 0.42
SDHBP21912 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SDHBP21912 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SDHBP21912 AP002414.3-201ENST00000589352 1468 ntBASIC17.69■□□□□ 0.42
SDHBP21912 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SDHBP21912 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SDHBP21912 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SDHBP21912 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SDHBP21912 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC17.69■□□□□ 0.42
SDHBP21912 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC17.69■□□□□ 0.42
SDHBP21912 ELL2P1-201ENST00000413990 1906 ntBASIC17.69■□□□□ 0.42
SDHBP21912 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
SDHBP21912 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SDHBP21912 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SDHBP21912 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC17.69■□□□□ 0.42
SDHBP21912 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC17.69■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms