Protein–RNA interactions for Protein: P19338

NCL, Nucleolin, humanhuman

Known RBP Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCLP19338 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC21.58■■□□□ 1.05
NCLP19338 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC21.58■■□□□ 1.05
NCLP19338 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
NCLP19338 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC21.58■■□□□ 1.04
NCLP19338 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
NCLP19338 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC21.58■■□□□ 1.04
NCLP19338 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC21.58■■□□□ 1.04
NCLP19338 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
NCLP19338 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC21.58■■□□□ 1.04
NCLP19338 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
NCLP19338 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
NCLP19338 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
NCLP19338 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
NCLP19338 CEP83-AS1-201ENST00000623122 2482 ntBASIC21.57■■□□□ 1.04
NCLP19338 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC21.57■■□□□ 1.04
NCLP19338 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
NCLP19338 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC21.57■■□□□ 1.04
NCLP19338 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC21.57■■□□□ 1.04
NCLP19338 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC21.57■■□□□ 1.04
NCLP19338 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
NCLP19338 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
NCLP19338 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
NCLP19338 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
NCLP19338 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC21.57■■□□□ 1.04
NCLP19338 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
NCLP19338 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC21.57■■□□□ 1.04
NCLP19338 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC21.57■■□□□ 1.04
NCLP19338 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
NCLP19338 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
NCLP19338 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
NCLP19338 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
NCLP19338 KRT8P32-201ENST00000512863 1461 ntBASIC21.57■■□□□ 1.04
NCLP19338 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
NCLP19338 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC21.57■■□□□ 1.04
NCLP19338 AL357033.4-201ENST00000617703 1807 ntBASIC21.57■■□□□ 1.04
NCLP19338 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC21.57■■□□□ 1.04
NCLP19338 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC21.57■■□□□ 1.04
NCLP19338 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC21.57■■□□□ 1.04
NCLP19338 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
NCLP19338 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
NCLP19338 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
NCLP19338 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
NCLP19338 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
NCLP19338 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
NCLP19338 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC21.56■■□□□ 1.04
NCLP19338 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC21.56■■□□□ 1.04
NCLP19338 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC21.56■■□□□ 1.04
NCLP19338 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
NCLP19338 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
NCLP19338 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
NCLP19338 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
NCLP19338 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC21.56■■□□□ 1.04
NCLP19338 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
NCLP19338 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
NCLP19338 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC21.56■■□□□ 1.04
NCLP19338 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
NCLP19338 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
NCLP19338 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC21.56■■□□□ 1.04
NCLP19338 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC21.56■■□□□ 1.04
NCLP19338 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC21.55■■□□□ 1.04
NCLP19338 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC21.55■■□□□ 1.04
NCLP19338 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
NCLP19338 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
NCLP19338 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC21.55■■□□□ 1.04
NCLP19338 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
NCLP19338 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC21.55■■□□□ 1.04
NCLP19338 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC21.55■■□□□ 1.04
NCLP19338 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC21.55■■□□□ 1.04
NCLP19338 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
NCLP19338 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
NCLP19338 BX088651.1-201ENST00000540551 451 ntBASIC21.55■■□□□ 1.04
NCLP19338 RPS15-203ENST00000586096 570 ntTSL 2 BASIC21.55■■□□□ 1.04
NCLP19338 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
NCLP19338 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC21.55■■□□□ 1.04
NCLP19338 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
NCLP19338 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
NCLP19338 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC21.55■■□□□ 1.04
NCLP19338 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
NCLP19338 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC21.55■■□□□ 1.04
NCLP19338 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC21.55■■□□□ 1.04
NCLP19338 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC21.55■■□□□ 1.04
NCLP19338 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC21.55■■□□□ 1.04
NCLP19338 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC21.55■■□□□ 1.04
NCLP19338 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
NCLP19338 AC112777.1-201ENST00000540175 1423 ntBASIC21.55■■□□□ 1.04
NCLP19338 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC21.54■■□□□ 1.04
NCLP19338 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC21.54■■□□□ 1.04
NCLP19338 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC21.54■■□□□ 1.04
NCLP19338 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
NCLP19338 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
NCLP19338 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
NCLP19338 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
NCLP19338 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC21.54■■□□□ 1.04
NCLP19338 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
NCLP19338 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC21.54■■□□□ 1.04
NCLP19338 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
NCLP19338 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC21.54■■□□□ 1.04
NCLP19338 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC21.54■■□□□ 1.04
NCLP19338 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC21.54■■□□□ 1.04
NCLP19338 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC21.54■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms