Protein–RNA interactions for Protein: P04085

PDGFA, Platelet-derived growth factor subunit A, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFAP04085 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
PDGFAP04085 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PDGFAP04085 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PDGFAP04085 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PDGFAP04085 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC16.94■□□□□ 0.3
PDGFAP04085 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PDGFAP04085 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC16.94■□□□□ 0.3
PDGFAP04085 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
PDGFAP04085 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PDGFAP04085 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC16.94■□□□□ 0.3
PDGFAP04085 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC16.94■□□□□ 0.3
PDGFAP04085 GUSBP12-201ENST00000513727 720 ntBASIC16.94■□□□□ 0.3
PDGFAP04085 MOK-208ENST00000519058 917 ntTSL 2 BASIC16.94■□□□□ 0.3
PDGFAP04085 SLC25A1P1-201ENST00000528351 927 ntBASIC16.94■□□□□ 0.3
PDGFAP04085 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC16.94■□□□□ 0.3
PDGFAP04085 AC024563.2-201ENST00000603282 481 ntBASIC16.94■□□□□ 0.3
PDGFAP04085 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
PDGFAP04085 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
PDGFAP04085 AC034236.2-201ENST00000606662 1610 ntBASIC16.94■□□□□ 0.3
PDGFAP04085 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PDGFAP04085 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PDGFAP04085 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PDGFAP04085 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC16.94■□□□□ 0.3
PDGFAP04085 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PDGFAP04085 AC090340.1-201ENST00000620778 4980 ntBASIC16.94■□□□□ 0.3
PDGFAP04085 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC16.94■□□□□ 0.3
PDGFAP04085 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC16.94■□□□□ 0.3
PDGFAP04085 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
PDGFAP04085 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC16.94■□□□□ 0.3
PDGFAP04085 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC16.94■□□□□ 0.3
PDGFAP04085 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
PDGFAP04085 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PDGFAP04085 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
PDGFAP04085 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PDGFAP04085 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PDGFAP04085 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC16.93■□□□□ 0.3
PDGFAP04085 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC16.93■□□□□ 0.3
PDGFAP04085 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
PDGFAP04085 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
PDGFAP04085 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PDGFAP04085 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PDGFAP04085 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
PDGFAP04085 PPIE-208ENST00000470213 927 ntTSL 3 BASIC16.93■□□□□ 0.3
PDGFAP04085 CDV3-207ENST00000508481 661 ntTSL 3 BASIC16.93■□□□□ 0.3
PDGFAP04085 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
PDGFAP04085 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PDGFAP04085 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
PDGFAP04085 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
PDGFAP04085 AC139530.3-201ENST00000620344 690 ntBASIC16.93■□□□□ 0.3
PDGFAP04085 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC16.93■□□□□ 0.3
PDGFAP04085 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC16.93■□□□□ 0.3
PDGFAP04085 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC16.93■□□□□ 0.3
PDGFAP04085 AC012313.1-201ENST00000593393 3059 ntBASIC16.93■□□□□ 0.3
PDGFAP04085 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PDGFAP04085 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC16.93■□□□□ 0.3
PDGFAP04085 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC16.93■□□□□ 0.3
PDGFAP04085 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC16.93■□□□□ 0.3
PDGFAP04085 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
PDGFAP04085 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PDGFAP04085 IL9RP2-201ENST00000423948 1312 ntBASIC16.93■□□□□ 0.3
PDGFAP04085 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PDGFAP04085 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
PDGFAP04085 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PDGFAP04085 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
PDGFAP04085 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC16.93■□□□□ 0.3
PDGFAP04085 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
PDGFAP04085 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC16.93■□□□□ 0.3
PDGFAP04085 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PDGFAP04085 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
PDGFAP04085 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
PDGFAP04085 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PDGFAP04085 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PDGFAP04085 TREX1-205ENST00000625293 1783 ntBASIC16.92■□□□□ 0.3
PDGFAP04085 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC16.92■□□□□ 0.3
PDGFAP04085 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC16.92■□□□□ 0.3
PDGFAP04085 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
PDGFAP04085 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
PDGFAP04085 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
PDGFAP04085 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
PDGFAP04085 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC16.92■□□□□ 0.3
PDGFAP04085 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
PDGFAP04085 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC16.92■□□□□ 0.3
PDGFAP04085 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC16.92■□□□□ 0.3
PDGFAP04085 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PDGFAP04085 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
PDGFAP04085 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PDGFAP04085 MIR574-201ENST00000385209 96 ntBASIC16.92■□□□□ 0.3
PDGFAP04085 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
PDGFAP04085 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC16.92■□□□□ 0.3
PDGFAP04085 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
PDGFAP04085 ABR-217ENST00000572441 563 ntTSL 4 BASIC16.92■□□□□ 0.3
PDGFAP04085 MIR3180-4-201ENST00000582223 153 ntBASIC16.92■□□□□ 0.3
PDGFAP04085 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC16.92■□□□□ 0.3
PDGFAP04085 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC16.92■□□□□ 0.3
PDGFAP04085 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC16.92■□□□□ 0.3
PDGFAP04085 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PDGFAP04085 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PDGFAP04085 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC16.92■□□□□ 0.3
PDGFAP04085 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
PDGFAP04085 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC16.92■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms