Protein–RNA interactions for Protein: A6NHC0

CAPN8, Calpain-8, humanhuman

Predictions only

Length 703 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN8A6NHC0 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CAPN8A6NHC0 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
CAPN8A6NHC0 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC18.41■□□□□ 0.54
CAPN8A6NHC0 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CAPN8A6NHC0 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC18.41■□□□□ 0.54
CAPN8A6NHC0 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CAPN8A6NHC0 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CAPN8A6NHC0 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC18.41■□□□□ 0.54
CAPN8A6NHC0 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CAPN8A6NHC0 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC18.4■□□□□ 0.54
CAPN8A6NHC0 LINC01311-201ENST00000565162 1445 ntBASIC18.4■□□□□ 0.54
CAPN8A6NHC0 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC18.4■□□□□ 0.54
CAPN8A6NHC0 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CAPN8A6NHC0 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CAPN8A6NHC0 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CAPN8A6NHC0 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CAPN8A6NHC0 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC18.4■□□□□ 0.54
CAPN8A6NHC0 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CAPN8A6NHC0 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC18.4■□□□□ 0.54
CAPN8A6NHC0 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CAPN8A6NHC0 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CAPN8A6NHC0 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
CAPN8A6NHC0 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC18.4■□□□□ 0.54
CAPN8A6NHC0 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CAPN8A6NHC0 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC18.4■□□□□ 0.54
CAPN8A6NHC0 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC18.4■□□□□ 0.54
CAPN8A6NHC0 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC18.4■□□□□ 0.54
CAPN8A6NHC0 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CAPN8A6NHC0 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CAPN8A6NHC0 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CAPN8A6NHC0 HLA-F-220ENST00000434407 884 ntBASIC18.4■□□□□ 0.54
CAPN8A6NHC0 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CAPN8A6NHC0 LY6E-213ENST00000522528 606 ntTSL 3 BASIC18.4■□□□□ 0.54
CAPN8A6NHC0 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC18.4■□□□□ 0.54
CAPN8A6NHC0 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
CAPN8A6NHC0 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CAPN8A6NHC0 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC18.4■□□□□ 0.54
CAPN8A6NHC0 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC18.4■□□□□ 0.54
CAPN8A6NHC0 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CAPN8A6NHC0 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC18.4■□□□□ 0.54
CAPN8A6NHC0 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC18.4■□□□□ 0.54
CAPN8A6NHC0 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CAPN8A6NHC0 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CAPN8A6NHC0 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CAPN8A6NHC0 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CAPN8A6NHC0 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CAPN8A6NHC0 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CAPN8A6NHC0 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CAPN8A6NHC0 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
CAPN8A6NHC0 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.54
CAPN8A6NHC0 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
CAPN8A6NHC0 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC18.39■□□□□ 0.54
CAPN8A6NHC0 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.54
CAPN8A6NHC0 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
CAPN8A6NHC0 ASL-204ENST00000395331 1538 ntTSL 5 BASIC18.39■□□□□ 0.54
CAPN8A6NHC0 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.54
CAPN8A6NHC0 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CAPN8A6NHC0 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC18.39■□□□□ 0.53
CAPN8A6NHC0 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CAPN8A6NHC0 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CAPN8A6NHC0 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
CAPN8A6NHC0 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
CAPN8A6NHC0 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
CAPN8A6NHC0 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CAPN8A6NHC0 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CAPN8A6NHC0 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC18.39■□□□□ 0.53
CAPN8A6NHC0 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CAPN8A6NHC0 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC18.39■□□□□ 0.53
CAPN8A6NHC0 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC18.39■□□□□ 0.53
CAPN8A6NHC0 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC18.39■□□□□ 0.53
CAPN8A6NHC0 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC18.39■□□□□ 0.53
CAPN8A6NHC0 CLN6-214ENST00000636314 442 ntTSL 3 BASIC18.39■□□□□ 0.53
CAPN8A6NHC0 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CAPN8A6NHC0 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CAPN8A6NHC0 EFTUD1P1-204ENST00000560401 1798 ntBASIC18.39■□□□□ 0.53
CAPN8A6NHC0 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CAPN8A6NHC0 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC18.39■□□□□ 0.53
CAPN8A6NHC0 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC18.39■□□□□ 0.53
CAPN8A6NHC0 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC18.39■□□□□ 0.53
CAPN8A6NHC0 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
CAPN8A6NHC0 AC067852.2-201ENST00000590513 2313 ntBASIC18.39■□□□□ 0.53
CAPN8A6NHC0 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
CAPN8A6NHC0 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC18.39■□□□□ 0.53
CAPN8A6NHC0 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC18.39■□□□□ 0.53
CAPN8A6NHC0 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
CAPN8A6NHC0 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CAPN8A6NHC0 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CAPN8A6NHC0 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC18.38■□□□□ 0.53
CAPN8A6NHC0 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
CAPN8A6NHC0 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CAPN8A6NHC0 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
CAPN8A6NHC0 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CAPN8A6NHC0 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
CAPN8A6NHC0 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC18.38■□□□□ 0.53
CAPN8A6NHC0 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CAPN8A6NHC0 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC18.38■□□□□ 0.53
CAPN8A6NHC0 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
CAPN8A6NHC0 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
CAPN8A6NHC0 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CAPN8A6NHC0 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms