Protein–RNA interactions for Protein: Q9UMS6

SYNPO2, Synaptopodin-2, humanhuman

Predictions only

Length 1,093 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2Q9UMS6 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC20.82■□□□□ 0.92
SYNPO2Q9UMS6 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SYNPO2Q9UMS6 SCARNA2-201ENST00000458748 420 ntBASIC20.82■□□□□ 0.92
SYNPO2Q9UMS6 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
SYNPO2Q9UMS6 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SYNPO2Q9UMS6 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SYNPO2Q9UMS6 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
SYNPO2Q9UMS6 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
SYNPO2Q9UMS6 PAN3-AS1-201ENST00000563843 1351 ntBASIC20.82■□□□□ 0.92
SYNPO2Q9UMS6 KRT8P47-201ENST00000604727 1398 ntBASIC20.82■□□□□ 0.92
SYNPO2Q9UMS6 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
SYNPO2Q9UMS6 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SYNPO2Q9UMS6 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
SYNPO2Q9UMS6 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC20.82■□□□□ 0.92
SYNPO2Q9UMS6 TNXA-203ENST00000507684 2038 ntBASIC20.82■□□□□ 0.92
SYNPO2Q9UMS6 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
SYNPO2Q9UMS6 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC20.81■□□□□ 0.92
SYNPO2Q9UMS6 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC20.81■□□□□ 0.92
SYNPO2Q9UMS6 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC20.81■□□□□ 0.92
SYNPO2Q9UMS6 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
SYNPO2Q9UMS6 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
SYNPO2Q9UMS6 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC20.81■□□□□ 0.92
SYNPO2Q9UMS6 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SYNPO2Q9UMS6 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC20.81■□□□□ 0.92
SYNPO2Q9UMS6 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SYNPO2Q9UMS6 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SYNPO2Q9UMS6 SRP19-202ENST00000445150 833 ntTSL 2 BASIC20.81■□□□□ 0.92
SYNPO2Q9UMS6 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC20.81■□□□□ 0.92
SYNPO2Q9UMS6 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
SYNPO2Q9UMS6 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC20.81■□□□□ 0.92
SYNPO2Q9UMS6 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC20.81■□□□□ 0.92
SYNPO2Q9UMS6 RNA5SP419-201ENST00000515908 135 ntBASIC20.81■□□□□ 0.92
SYNPO2Q9UMS6 PENK-208ENST00000523051 772 ntTSL 5 BASIC20.81■□□□□ 0.92
SYNPO2Q9UMS6 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC20.81■□□□□ 0.92
SYNPO2Q9UMS6 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC20.81■□□□□ 0.92
SYNPO2Q9UMS6 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
SYNPO2Q9UMS6 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC20.81■□□□□ 0.92
SYNPO2Q9UMS6 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SYNPO2Q9UMS6 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
SYNPO2Q9UMS6 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC20.81■□□□□ 0.92
SYNPO2Q9UMS6 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
SYNPO2Q9UMS6 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
SYNPO2Q9UMS6 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
SYNPO2Q9UMS6 HLA-A-201ENST00000376802 1334 ntBASIC20.8■□□□□ 0.92
SYNPO2Q9UMS6 SP100-208ENST00000427101 1922 ntTSL 2 BASIC20.8■□□□□ 0.92
SYNPO2Q9UMS6 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC20.8■□□□□ 0.92
SYNPO2Q9UMS6 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SYNPO2Q9UMS6 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SYNPO2Q9UMS6 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SYNPO2Q9UMS6 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
SYNPO2Q9UMS6 AL096828.2-201ENST00000567259 1965 ntBASIC20.8■□□□□ 0.92
SYNPO2Q9UMS6 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
SYNPO2Q9UMS6 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
SYNPO2Q9UMS6 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC20.8■□□□□ 0.92
SYNPO2Q9UMS6 FAM197Y8-203ENST00000450145 560 ntBASIC20.8■□□□□ 0.92
SYNPO2Q9UMS6 AC018712.1-201ENST00000455767 687 ntBASIC20.8■□□□□ 0.92
SYNPO2Q9UMS6 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC20.8■□□□□ 0.92
SYNPO2Q9UMS6 AF186996.4-201ENST00000467186 377 ntBASIC20.8■□□□□ 0.92
SYNPO2Q9UMS6 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC20.8■□□□□ 0.92
SYNPO2Q9UMS6 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC20.8■□□□□ 0.92
SYNPO2Q9UMS6 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC20.8■□□□□ 0.92
SYNPO2Q9UMS6 COX5A-202ENST00000562233 441 ntTSL 3 BASIC20.8■□□□□ 0.92
SYNPO2Q9UMS6 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC20.8■□□□□ 0.92
SYNPO2Q9UMS6 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
SYNPO2Q9UMS6 AL773604.1-201ENST00000617417 272 ntBASIC20.8■□□□□ 0.92
SYNPO2Q9UMS6 AP000867.4-201ENST00000641616 219 ntBASIC20.8■□□□□ 0.92
SYNPO2Q9UMS6 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
SYNPO2Q9UMS6 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SYNPO2Q9UMS6 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC20.8■□□□□ 0.92
SYNPO2Q9UMS6 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
SYNPO2Q9UMS6 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SYNPO2Q9UMS6 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC20.79■□□□□ 0.92
SYNPO2Q9UMS6 POR-209ENST00000439269 1858 ntTSL 2 BASIC20.79■□□□□ 0.92
SYNPO2Q9UMS6 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SYNPO2Q9UMS6 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC20.79■□□□□ 0.92
SYNPO2Q9UMS6 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC20.79■□□□□ 0.92
SYNPO2Q9UMS6 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC20.79■□□□□ 0.92
SYNPO2Q9UMS6 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
SYNPO2Q9UMS6 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SYNPO2Q9UMS6 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
SYNPO2Q9UMS6 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SYNPO2Q9UMS6 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC20.79■□□□□ 0.92
SYNPO2Q9UMS6 FUOM-202ENST00000368551 628 ntTSL 3 BASIC20.79■□□□□ 0.92
SYNPO2Q9UMS6 MED22-202ENST00000371999 987 ntTSL 3 BASIC20.79■□□□□ 0.92
SYNPO2Q9UMS6 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SYNPO2Q9UMS6 HIST2H3DP1-201ENST00000401004 416 ntBASIC20.79■□□□□ 0.92
SYNPO2Q9UMS6 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC20.79■□□□□ 0.92
SYNPO2Q9UMS6 MTDHP3-201ENST00000594186 672 ntBASIC20.79■□□□□ 0.92
SYNPO2Q9UMS6 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC20.79■□□□□ 0.92
SYNPO2Q9UMS6 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC20.79■□□□□ 0.92
SYNPO2Q9UMS6 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SYNPO2Q9UMS6 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SYNPO2Q9UMS6 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SYNPO2Q9UMS6 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC20.79■□□□□ 0.92
SYNPO2Q9UMS6 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SYNPO2Q9UMS6 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC20.79■□□□□ 0.92
SYNPO2Q9UMS6 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SYNPO2Q9UMS6 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
SYNPO2Q9UMS6 STX6-204ENST00000542060 4809 ntTSL 2 BASIC20.79■□□□□ 0.92
SYNPO2Q9UMS6 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC20.79■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms