Protein–RNA interactions for Protein: Q6ZS62

COLCA1, Colorectal cancer-associated protein 1, humanhuman

Predictions only

Length 124 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1Q6ZS62 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
COLCA1Q6ZS62 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
COLCA1Q6ZS62 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC15.63■□□□□ 0.09
COLCA1Q6ZS62 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
COLCA1Q6ZS62 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC15.63■□□□□ 0.09
COLCA1Q6ZS62 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
COLCA1Q6ZS62 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
COLCA1Q6ZS62 TMPOP1-202ENST00000424642 1267 ntBASIC15.63■□□□□ 0.09
COLCA1Q6ZS62 KRT18P48-201ENST00000434763 852 ntBASIC15.63■□□□□ 0.09
COLCA1Q6ZS62 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC15.63■□□□□ 0.09
COLCA1Q6ZS62 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC15.63■□□□□ 0.09
COLCA1Q6ZS62 AC112907.2-201ENST00000448639 330 ntBASIC15.63■□□□□ 0.09
COLCA1Q6ZS62 AC092647.4-201ENST00000457211 535 ntBASIC15.63■□□□□ 0.09
COLCA1Q6ZS62 AL359075.1-203ENST00000462729 1002 ntBASIC15.63■□□□□ 0.09
COLCA1Q6ZS62 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC15.63■□□□□ 0.09
COLCA1Q6ZS62 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC15.63■□□□□ 0.09
COLCA1Q6ZS62 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC15.63■□□□□ 0.09
COLCA1Q6ZS62 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC15.63■□□□□ 0.09
COLCA1Q6ZS62 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
COLCA1Q6ZS62 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
COLCA1Q6ZS62 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
COLCA1Q6ZS62 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
COLCA1Q6ZS62 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
COLCA1Q6ZS62 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC15.63■□□□□ 0.09
COLCA1Q6ZS62 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
COLCA1Q6ZS62 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
COLCA1Q6ZS62 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
COLCA1Q6ZS62 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
COLCA1Q6ZS62 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
COLCA1Q6ZS62 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC15.63■□□□□ 0.09
COLCA1Q6ZS62 LINC00602-201ENST00000629776 2065 ntBASIC15.63■□□□□ 0.09
COLCA1Q6ZS62 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
COLCA1Q6ZS62 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC15.63■□□□□ 0.09
COLCA1Q6ZS62 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC15.63■□□□□ 0.09
COLCA1Q6ZS62 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC15.63■□□□□ 0.09
COLCA1Q6ZS62 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
COLCA1Q6ZS62 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
COLCA1Q6ZS62 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC15.62■□□□□ 0.09
COLCA1Q6ZS62 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
COLCA1Q6ZS62 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
COLCA1Q6ZS62 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
COLCA1Q6ZS62 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
COLCA1Q6ZS62 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
COLCA1Q6ZS62 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC15.62■□□□□ 0.09
COLCA1Q6ZS62 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
COLCA1Q6ZS62 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
COLCA1Q6ZS62 AL133373.2-201ENST00000623187 2828 ntBASIC15.62■□□□□ 0.09
COLCA1Q6ZS62 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
COLCA1Q6ZS62 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC15.62■□□□□ 0.09
COLCA1Q6ZS62 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
COLCA1Q6ZS62 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC15.62■□□□□ 0.09
COLCA1Q6ZS62 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
COLCA1Q6ZS62 SPEG-225ENST00000617028 815 ntTSL 5 BASIC15.62■□□□□ 0.09
COLCA1Q6ZS62 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
COLCA1Q6ZS62 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
COLCA1Q6ZS62 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
COLCA1Q6ZS62 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
COLCA1Q6ZS62 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC15.62■□□□□ 0.09
COLCA1Q6ZS62 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC15.62■□□□□ 0.09
COLCA1Q6ZS62 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC15.62■□□□□ 0.09
COLCA1Q6ZS62 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
COLCA1Q6ZS62 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
COLCA1Q6ZS62 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC15.62■□□□□ 0.09
COLCA1Q6ZS62 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
COLCA1Q6ZS62 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
COLCA1Q6ZS62 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
COLCA1Q6ZS62 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC15.61■□□□□ 0.09
COLCA1Q6ZS62 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC15.61■□□□□ 0.09
COLCA1Q6ZS62 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
COLCA1Q6ZS62 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC15.61■□□□□ 0.09
COLCA1Q6ZS62 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC15.61■□□□□ 0.09
COLCA1Q6ZS62 CD276-203ENST00000537340 2439 ntTSL 2 BASIC15.61■□□□□ 0.09
COLCA1Q6ZS62 AC018470.1-201ENST00000624790 3129 ntBASIC15.61■□□□□ 0.09
COLCA1Q6ZS62 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
COLCA1Q6ZS62 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
COLCA1Q6ZS62 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
COLCA1Q6ZS62 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
COLCA1Q6ZS62 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC15.61■□□□□ 0.09
COLCA1Q6ZS62 KRT18P65-201ENST00000439811 1286 ntBASIC15.61■□□□□ 0.09
COLCA1Q6ZS62 PPOX-214ENST00000535223 664 ntTSL 3 BASIC15.61■□□□□ 0.09
COLCA1Q6ZS62 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC15.61■□□□□ 0.09
COLCA1Q6ZS62 LINC01238-205ENST00000567549 1107 ntBASIC15.61■□□□□ 0.09
COLCA1Q6ZS62 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC15.61■□□□□ 0.09
COLCA1Q6ZS62 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
COLCA1Q6ZS62 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
COLCA1Q6ZS62 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
COLCA1Q6ZS62 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
COLCA1Q6ZS62 AC022898.2-201ENST00000616822 1312 ntBASIC15.61■□□□□ 0.09
COLCA1Q6ZS62 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
COLCA1Q6ZS62 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
COLCA1Q6ZS62 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
COLCA1Q6ZS62 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
COLCA1Q6ZS62 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
COLCA1Q6ZS62 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC15.61■□□□□ 0.09
COLCA1Q6ZS62 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
COLCA1Q6ZS62 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC15.6■□□□□ 0.09
COLCA1Q6ZS62 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
COLCA1Q6ZS62 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC15.6■□□□□ 0.09
COLCA1Q6ZS62 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC15.6■□□□□ 0.09
COLCA1Q6ZS62 LINC01311-201ENST00000565162 1445 ntBASIC15.6■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 44.8 ms